[Advance in transcriptomic studies of ginseng species]
- PMID: 28933079
- DOI: 10.4268/cjcmm20162209
[Advance in transcriptomic studies of ginseng species]
Abstract
There are many valuable medicinal plants in Ginseng genus belonging to Araliaceae. Among them, Panax ginseng, P. quinquefolium and P. notoginseng are the most famous species. With the development of next-generation sequencing (NGS) technologies, sequencing and analysis of transcriptomes have become powerful tools for discovery of novel genes, screening molecular markers and elucidation of specific biosynthetic pathway of secondary metabolites. Their transcriptomes provided abundant genes for further study on functional genomics. Here this paper summarized the recent advances in the transcriptomic studies of these three medicinal plants, including discovery of novel genes and elucidation of metabolic regulation, which will contribute to functional genomics in ginseng species.
Keywords: Panax ginseng; Panax notoginseng; Panax quinquefolium; transcriptome.
Copyright© by the Chinese Pharmaceutical Association.
Conflict of interest statement
The authors of this article and the planning committee members and staff have no relevant financial relationships with commercial interests to disclose.
Similar articles
-
Transcriptomic profiling reveals MEP pathway contributing to ginsenoside biosynthesis in Panax ginseng.BMC Genomics. 2019 May 17;20(1):383. doi: 10.1186/s12864-019-5718-x. BMC Genomics. 2019. PMID: 31101014 Free PMC article.
-
High-throughput sequencing and characterization of the small RNA transcriptome reveal features of novel and conserved microRNAs in Panax ginseng.PLoS One. 2012;7(9):e44385. doi: 10.1371/journal.pone.0044385. Epub 2012 Sep 4. PLoS One. 2012. PMID: 22962612 Free PMC article.
-
Time-Course Transcriptome Analysis Reveals Resistance Genes of Panax ginseng Induced by Cylindrocarpon destructans Infection Using RNA-Seq.PLoS One. 2016 Feb 18;11(2):e0149408. doi: 10.1371/journal.pone.0149408. eCollection 2016. PLoS One. 2016. PMID: 26890788 Free PMC article.
-
Renaissance in phytomedicines: promising implications of NGS technologies.Planta. 2016 Jul;244(1):19-38. doi: 10.1007/s00425-016-2492-8. Epub 2016 Mar 22. Planta. 2016. PMID: 27002972 Review.
-
De Novo Deep Transcriptome Analysis of Medicinal Plants for Gene Discovery in Biosynthesis of Plant Natural Products.Methods Enzymol. 2016;576:19-45. doi: 10.1016/bs.mie.2016.03.001. Epub 2016 Apr 4. Methods Enzymol. 2016. PMID: 27480681 Review.
Publication types
MeSH terms
LinkOut - more resources
Other Literature Sources