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. 2017 Oct 19;5(42):e01057-17.
doi: 10.1128/genomeA.01057-17.

Whole-Genome Sequencing of a Human Clinical Isolate of the Novel Species Klebsiella quasivariicola sp. nov

Affiliations

Whole-Genome Sequencing of a Human Clinical Isolate of the Novel Species Klebsiella quasivariicola sp. nov

S Wesley Long et al. Genome Announc. .

Abstract

In a study of 1,777 Klebsiella strains, we discovered KPN1705, which was distinct from all recognized Klebsiella spp. We closed the genome of strain KPN1705 using a hybrid of Illumina short-read and Oxford Nanopore long-read technologies. For this novel species, we propose the name Klebsiella quasivariicola sp. nov.

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References

    1. Wyres KL, Holt KE. 2016. Klebsiella pneumoniae population genomics and antimicrobial-resistant clones. Trends Microbiol 24:944–956. doi:10.1016/j.tim.2016.09.007. - DOI - PubMed
    1. Li B, Zhao Y, Liu C, Chen Z, Zhou D. 2014. Molecular pathogenesis of Klebsiella pneumoniae. Future Microbiol 9:1071–1081. doi:10.2217/fmb.14.48. - DOI - PubMed
    1. Long SW, Olsen RJ, Eagar TN, Beres SB, Zhao P, Davis JJ, Brettin T, Xia F, Musser JM. 2017. Population genomic analysis of 1,777 extended-spectrum beta-lactamase-producing Klebsiella pneumoniae isolates, Houston, Texas: unexpected abundance of clonal group 307. mBio 8:e00489-17. doi:10.1128/mBio.00489-17. - DOI - PMC - PubMed
    1. Long SW, Linson SE, Ojeda Saavedra M, Cantu C, Davis JJ, Brettin T, Olsen RJ. 2017. Whole-genome sequencing of human clinical Klebsiella pneumoniae isolates reveals misidentification and misunderstandings of Klebsiella pneumoniae, Klebsiella variicola, and Klebsiella quasipneumoniae. mSphere 2. doi:10.1128/mSphereDirect.00290-17. - DOI - PMC - PubMed
    1. Long SW, Linson SE, Saavedra MO, Cantu C, Davis JJ, Brettin T, Olsen RJ. 2017. Discovery and whole genome sequencing of a human clinical isolate of the novel species Klebsiella quasivariicola sp. nov. bioRxiv doi:10.1101/176743. - DOI - PMC - PubMed

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