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Review
. 2017 Dec 20;6(4):47.
doi: 10.3390/biology6040047.

Was the Watchmaker Blind? Or Was She One-Eyed?

Affiliations
Review

Was the Watchmaker Blind? Or Was She One-Eyed?

Raymond Noble et al. Biology (Basel). .

Abstract

The question whether evolution is blind is usually presented as a choice between no goals at all ('the blind watchmaker') and long-term goals which would be external to the organism, for example in the form of special creation or intelligent design. The arguments either way do not address the question whether there are short-term goals within rather than external to organisms. Organisms and their interacting populations have evolved mechanisms by which they can harness blind stochasticity and so generate rapid functional responses to environmental challenges. They can achieve this by re-organising their genomes and/or their regulatory networks. Epigenetic as well as DNA changes are involved. Evolution may have no foresight, but it is at least partially directed by organisms themselves and by the populations of which they form part. Similar arguments support partial direction in the evolution of behavior.

Keywords: adaptability driver; blind chance; evolutionary hold mechanisms; harnessing stochasticity; hypermutation; internal and external goals.

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Conflict of interest statement

The authors declare no conflict of interest.

Figures

Figure 1
Figure 1
Schematic diagram of gene-specific targeted hyper-mutation in immunoglobulin gene loci. The mutation rate is greatly increased only in the variable part of the genome, which is a ~1.5 kilobase region in each of the three immunoglobulin loci. In this figure, the rectangular elements (V, J, MAR, iEκ, Cκ, 3′Eκ) represent different functional parts of the DNA sequence for the immunoglobulin protein. V is the variable part, subject to hypermutation, while the other parts are fixed. For further details on the functions of the parts see Odegard and Schatz [22]. Those details are not important for the purposes of this article.
Figure 2
Figure 2
Development of Waddington’s (1957) landscape diagram [43]. The original diagram was simply the lower half of this diagram, which Waddington used to indicate that the developmental phenotype (the landscape) is not directly dependent on the genes (the pegs at the bottom) but also depends on the regulatory networks represented as lying in between genes and the phenotype. Our version of the diagram incorporates two new features. First, organisms are open systems sensitive to the environment. This is represented by the top half of the diagram. Second, the regulatory networks in the lower half (the original half) of the diagram act to buffer genetic variation. This is represented by a ‘cloud’ covering a large fraction of the genome, corresponding to the fact that many mutations at the genome level are silent functionally. The regulatory networks can buffer many variations at the genome level. The filtering action of the ‘cloud’ performs a function similar to that of the ‘hold’ mechanism in this article. Differential mutation rates are not therefore essential to enable organisms to guide their own evolution.

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