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. 2018 Feb 1;6(5):e01538-17.
doi: 10.1128/genomeA.01538-17.

Complete Genome Sequence of Cluster J Mycobacteriophage Superphikiman

Pratik Pradhan  1 , Sprikena Nako  1 , Trinh Tran  1 , Lavanya S Aluri  1 , Dharman Anandarajan  1 , Niteesha Betini  1 , Shivangi D Bhatt  1 , Swetha Chengalvala  1 , Nicole E Cox  1 , Bela P Delvadia  1 , Aishwary S Desai  1 , Andrew M Devaney  1 , Brenna K Doyle  1 , Arden O Edgerton  1 , Matthew C Erlich  1 , Kevin C Fitzpatrick  1 , Esha A Gajjar  1 , Anjali Ganguly  1 , Ramnik S Gill  1 , Pauline M Good  1 , Nishtha Gupta  1 , Leila M Haddad  1 , Esther J Han  1 , Shelby Jain  1 , Andrew Jiang  1 , Andrew D Jurgielewicz  1 , Devneet K Kainth  1 , Jawhara M Karam  1 , Mallika Kodavatiganti  1 , Sinja J Kriete  1 , Catherine E MacDonald  1 , Josh P Maret  1 , Ashley E Mathew  1 , Maanasa Natrajan  1 , Nusrat M Nishu  1 , Nirali Patel  1 , Pooja D Patel  1 , Shivani Patel  1 , Kaustav Patra  1 , Karima K Rai  1 , Arghyadeep Sarkar  1 , Priyanka Shah  1 , Ravi K Tata  1 , Andrew H Tawfik  1 , Bhavya T Thuremella  1 , Justina Toma  1 , Shika Veera  1 , Vamsee K Vemulapalli  1 , Trevor V Vidas  1 , Katy S Vieira  1 , Gayathri Vijayakumar  1 , Tru A Walor  1 , Clara R White  1 , Brianna M Wong  1 , Shu L Zhao  1 , David W Bollivar  2 , Matthew T McDonald  1 , Ritu R Dalia  1 , Kevin P W Smith  1 , Joy L Little  3 , Susan M R Gurney  4
Affiliations

Complete Genome Sequence of Cluster J Mycobacteriophage Superphikiman

Pratik Pradhan et al. Genome Announc. .

Abstract

Mycobacteriophage Superphikiman is a cluster J bacteriophage which was isolated from soil collected in Philadelphia, PA. Superphikiman has a 109,799-bp genome with 239 predicted genes, including 2 tRNA genes.

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References

    1. Hatfull GF. 2012. The secret lives of mycobacteriophages. Adv Virus Res 82:179–288. doi: 10.1016/B978-0-12-394621-8.00015-7. - DOI - PubMed
    1. Delcher AL, Bratke KA, Powers EC, Salzberg SL. 2007. Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23:673–679. doi: 10.1093/bioinformatics/btm009. - DOI - PMC - PubMed
    1. Besemer J, Borodovsky M. 2005. GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses. Nucleic Acids Res 33:W451–W454. doi: 10.1093/nar/gki487. - DOI - PMC - PubMed
    1. Cresawn SG, Bogel M, Day N, Jacobs-Sera D, Hendrix RW, Hatfull GF. 2011. Phamerator: a bioinformatic tool for comparative bacteriophage genomics. BMC Bioinformatics 12:395. doi: 10.1186/1471-2105-12-395. - DOI - PMC - PubMed
    1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol 215:403–410. doi: 10.1016/S0022-2836(05)80360-2. - DOI - PubMed

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