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• A deep learning approach to programmable RNA switches.

  Angenent-Mari NM, Garruss AS, Soenksen LR, Church G, Collins JJ. Angenent-Mari NM, et al. Nat Commun. 2020 Oct 7;11(1):5057. doi: 10.1038/s41467-020-18677-1. Nat Commun. 2020. PMID: 33028812 Free PMC article.
• Recent developments in modeling, imaging, and monitoring of cardiovascular diseases using machine learning.

  Moradi H, Al-Hourani A, Concilia G, Khoshmanesh F, Nezami FR, Needham S, Baratchi S, Khoshmanesh K. Moradi H, et al. Biophys Rev. 2023 Jan 10;15(1):19-33. doi: 10.1007/s12551-022-01040-7. eCollection 2023 Feb. Biophys Rev. 2023. PMID: 36909958 Free PMC article. Review.
• Democratized image analytics by visual programming through integration of deep models and small-scale machine learning.

  Godec P, Pančur M, Ilenič N, Čopar A, Stražar M, Erjavec A, Pretnar A, Demšar J, Starič A, Toplak M, Žagar L, Hartman J, Wang H, Bellazzi R, Petrovič U, Garagna S, Zuccotti M, Park D, Shaulsky G, Zupan B. Godec P, et al. Nat Commun. 2019 Oct 7;10(1):4551. doi: 10.1038/s41467-019-12397-x. Nat Commun. 2019. PMID: 31591416 Free PMC article.
• Statistical and Machine Learning Approaches to Predict Gene Regulatory Networks From Transcriptome Datasets.

  Mochida K, Koda S, Inoue K, Nishii R. Mochida K, et al. Front Plant Sci. 2018 Nov 29;9:1770. doi: 10.3389/fpls.2018.01770. eCollection 2018. Front Plant Sci. 2018. PMID: 30555503 Free PMC article. Review.
• Annotation-efficient deep learning for automatic medical image segmentation.

  Wang S, Li C, Wang R, Liu Z, Wang M, Tan H, Wu Y, Liu X, Sun H, Yang R, Liu X, Chen J, Zhou H, Ben Ayed I, Zheng H. Wang S, et al. Nat Commun. 2021 Oct 8;12(1):5915. doi: 10.1038/s41467-021-26216-9. Nat Commun. 2021. PMID: 34625565 Free PMC article.