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. 2018 Apr 20;83(8):4525-4536.
doi: 10.1021/acs.joc.8b00270. Epub 2018 Apr 2.

Synthesis and Explosion Hazards of 4-Azido-l-phenylalanine

Affiliations

Synthesis and Explosion Hazards of 4-Azido-l-phenylalanine

Mark B Richardson et al. J Org Chem. .

Abstract

A reliable, scalable, cost-effective, and chromatography-free synthesis of 4-azido-l-phenylalanine beginning from l-phenylalanine is described. Investigations into the safety of the synthesis reveal that the Ullman-like Cu(I)-catalyzed azidation step does not represent a significant risk. The isolated 4-azido-l-phenylalanine product, however, exhibits previously undocumented explosive characteristics.

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Conflict of interest statement

Notes

The authors declare no competing financial interest.

Figures

Figure 1
Figure 1
Literature precedents for the construction of the phenyl azide in 4. Azidodediazoniation involves the use of explosive diazonium salts, and poisonous and explosive hydrazoic acid. A detonation involving the diazotransfer reagent, imiadazole-1-sulfonyl azide, has been reported by the Stick laboratory., A safety appraisal for the Ullman-like synthesis of phenyl azides has not previously appeared in the literature.
Figure 2
Figure 2
A heuristic proposal for understanding the mechanism of iodination by Suzuki’s reagent. The mechanism likely involves the formation of a polarized iodine intermediate, which then participates in SEAr reactions.
Figure 3
Figure 3
Potential explosion hazards associated with the synthesis of 4. Roman numerals (i–viii) denote the eight discreet chemical mixtures chosen for explosion risk evaluation by DSC; hazards v–viii were further evaluated by ARC.
Figure 4
Figure 4
Mosher amide analyses. The 1H NMR spectra of 9 (blue trace) and 10 (red trace) exhibit distinct ΔδSR values at the ester CH3, the α-proton, and both β-protons of the amino acid portion of the molecule. The Mosher acyl group also exhibits an unusually high ΔδSR value at its etheric -OCH3, apparently caused by diamagnetic shielding from the phenyl ring of the amino acid. The exquisite sensitivity of 19F NMR also provides high confidence in the optical purity, as no significant overlap is observed between the blue and red traces.
Figure 5
Figure 5
ORTEP representation of the molecular structure of Boc-Oxyma determined by single-crystal X-ray crystallography. Ellipsoids are shown at the 50% probability level. All hydrogens were discovered and are drawn as fixed-size spheres of radius 0.15Å.
Figure 6
Figure 6
Comparison of IR spectra of Boc-Oxyma in the carbonyl stretch region. A) IR spectrum of Boc-Oxyma (FT-IR/ATR); B) Previously reported IR spectrum of the same compound (FT-IR/KBr disc). The image has been reproduced from ref. and has been altered as follows: the spectrum has been reflected left-to-right.
Figure 7
Figure 7
The base-catalyzed formation of activated esters with Boc-Oxyma. The final step of the mechanism eliminates a tert-butoxide anion, allowing efficient activated ester generation in the presence of sub-stoichiometric quantities of the added base.
Figure 8
Figure 8
Menthyl ester analyses. The 1H NMR spectra of 13 (blue trace) and 14 (red trace) exhibit subtle ΔδLD values at the three methyl groups on the menthyl portion of the molecule, and the tert-butyl of the Boc protecting group. These slight differences are clearly apparent in the sample comprising a ~1:1 mixture of both stereoisomers (grey trace). The 13C NMR spectrum is less crowded, and the signals assigned to the carbons of the menthol isopropyl group, and a neighboring ring methylene, display the greatest ΔδLD values. The lack of common peaks between the blue and red traces indicates that no epimerization at the amino acid α-carbon has occurred during the synthesis of 2 and 3, or during the esterification reaction.
Scheme 1
Scheme 1
Synthesis of 4-azido-L-phenylalanine. Conditions: a) i) NaIO3, I2, AcOH/H2SO4, 70 °C, ii) NaIO4; b) Boc2O, Et3N, H2O/MeOH, 55 °C; c) N,N′-dimethylethylenediamine, CuI, NaN3, KOH, sodium ascorbate, EtOH/H2O, 25 °C; d) H2SO4/H2O, 1,4-dioxane, 25 °C.
Scheme 2
Scheme 2
Mosher amide synthesis. Conditions: a) SOCl2, MeOH, 50 °C, 2 h; b) (S)- or (R)-MTPA-Cl, iPr2NEt, DMAP, DMF, rt, 16 h.
Scheme 3
Scheme 3
Synthesis of Boc-Oxyma. Conditions: a) Boc2O, iPr2NEt (cat.), THF, 35 °C, 3.5 h.
Scheme 4
Scheme 4
Synthesis of menthyl esters using Boc-Oxyma as coupling agent. Conditions: a) Boc-Oxyma, iPr2NEt, DMAP, D- or L-menthol, EtOAc, rt, 24 h.

References

    1. Koonin EV, Novozhilov AS. IUBMB Life. 2009;61:99. - PMC - PubMed
    1. Wang L, Brock A, Herberich B, Schultz PG. Science. 2001;292:498. - PubMed
    2. Liu CC, Schultz PG. Annu Rev Biochem. 2010;79:413. - PubMed
    3. Furter R. Protein Sci. 1998;7:419. - PMC - PubMed
    1. Wang YS, Russell WK, Wang Z, Wan W, Dodd LE, Pai PJ, Russell DH, Liu WR. Mol BioSyst. 2011;7:714. - PubMed
    2. Hoesl MG, Budisa N. Curr Opin Biotechnol. 2012;23:751. - PubMed
    3. Wang YS, Fang X, Wallace AL, Wu B, Liu WR. J Am Chem Soc. 2012;134:2950. - PMC - PubMed
    4. Wang YS, Fang X, Chen HY, Wu B, Wang ZU, Hilty C, Liu WR. ACS Chem Biol. 2013;8:405. - PMC - PubMed
    1. Hendrickson TL, de Crécy-Lagard V, Schimmel P. Annu Rev Biochem. 2004;73:147. - PubMed
    2. Lang K, Chin JW. Chem Rev. 2014;114:4764. - PubMed
    3. Dumas A, Lercher L, Spicer CD, Davis BG. Chem Sci. 2015;6:50. - PMC - PubMed
    4. Zhang G, Zheng S, Liu H, Chen PR. Chem Soc Rev. 2015;44:3405. - PubMed
    1. Spicer CD, Davis BG. Chem Commun. 2011;47:1698. - PubMed

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