Taxonomy of the family Arenaviridae and the order Bunyavirales: update 2018

Piet Maes¹, Sergey V Alkhovsky², Yīmíng Bào³, Martin Beer⁴, Monica Birkhead⁵, Thomas Briese⁶, Michael J Buchmeier⁷, Charles H Calisher⁸, Rémi N Charrel⁹, Il Ryong Choi¹⁰, Christopher S Clegg¹¹, Juan Carlos de la Torre¹², Eric Delwart^{13

14}, Joseph L DeRisi¹⁵, Patrick L Di Bello¹⁶, Francesco Di Serio¹⁷, Michele Digiaro¹⁸, Valerian V Dolja¹⁹, Christian Drosten^{20

21

22}, Tobiasz Z Druciarek¹⁶, Jiang Du²³, Hideki Ebihara²⁴, Toufic Elbeaino¹⁸, Rose C Gergerich¹⁶, Amethyst N Gillis²⁵, Jean-Paul J Gonzalez²⁶, Anne-Lise Haenni²⁷, Jussi Hepojoki^{28

29}, Udo Hetzel^{29

30}, Thiện Hồ¹⁶, Ní Hóng³¹, Rakesh K Jain³², Petrus Jansen van Vuren^{5

33}, Qi Jin^{34

35}, Miranda Gilda Jonson³⁶, Sandra Junglen^{20

22}, Karen E Keller³⁷, Alan Kemp⁵, Anja Kipar^{29

30}, Nikola O Kondov¹³, Eugene V Koonin³⁸, Richard Kormelink³⁹, Yegor Korzyukov²⁸, Mart Krupovic⁴⁰, Amy J Lambert⁴¹, Alma G Laney⁴², Matthew LeBreton⁴³, Igor S Lukashevich⁴⁴, Marco Marklewitz^{20

22}, Wanda Markotter^{5

33}, Giovanni P Martelli⁴⁵, Robert R Martin³⁷, Nicole Mielke-Ehret⁴⁶, Hans-Peter Mühlbach⁴⁶, Beatriz Navarro¹⁷, Terry Fei Fan Ng¹⁴, Márcio Roberto Teixeira Nunes^{47

48}, Gustavo Palacios⁴⁹, Janusz T Pawęska^{5

33}, Clarence J Peters⁵⁰, Alexander Plyusnin²⁸, Sheli R Radoshitzky⁴⁹, Víctor Romanowski⁵¹, Pertteli Salmenperä^{28

52}, Maria S Salvato⁵³, Hélène Sanfaçon⁵⁴, Takahide Sasaya⁵⁵, Connie Schmaljohn⁴⁹, Bradley S Schneider²⁵, Yukio Shirako⁵⁶, Stuart Siddell⁵⁷, Tarja A Sironen²⁸, Mark D Stenglein⁵⁸, Nadia Storm⁵, Harikishan Sudini⁵⁹, Robert B Tesh⁴⁸, Ioannis E Tzanetakis¹⁶, Mangala Uppala⁵⁹, Olli Vapalahti^{28

30

60}, Nikos Vasilakis⁴⁸, Peter J Walker⁶¹, Guópíng Wáng³¹, Lìpíng Wáng³¹, Yànxiăng Wáng³¹, Tàiyún Wèi⁶², Michael R Wiley^{49

63}, Yuri I Wolf³⁸, Nathan D Wolfe^{25

64}, Zhìqiáng Wú²³, Wénxìng Xú^{31

65

66

67}, Li Yang⁶⁸, Zuòkūn Yāng³¹, Shyi-Dong Yeh⁶⁹, Yǒng-Zhèn Zhāng⁷⁰, Yàzhōu Zhèng³¹, Xueping Zhou⁷¹, Chénxī Zhū³¹, Florian Zirkel²¹, Jens H Kuhn⁷²

Affiliations

¹ Zoonotic Infectious Diseases Unit, KU Leuven, Leuven, Belgium.
² D. I. Ivanovsky Institute of Virology, N. F. Gamaleya Federal Research Center for Epidemiology and Microbiology, Ministry of Health of the Russian Federation, Moscow, Russia.
³ Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China.
⁴ Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany.
⁵ Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, South Africa.
⁶ Department of Epidemiology, Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, New York, USA.
⁷ Department of Molecular Biology and Biochemistry, University of California, Irvine, CA, USA.
⁸ Arthropod-Borne and Infectious Diseases Laboratory, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, USA.
⁹ Unité des Virus Emergents, Aix-Marseille University, IRD 190, Inserm 1207, IHU Méditerranée Infection, Marseille, France.
¹⁰ Plant Breeding Genetics and Biotechnology Division, International Rice Research Institute, Los Baños, Philippines.
¹¹ Les Mandinaux, Le Grand Madieu, France.
¹² Department of Immunology and Microbial Science, IMM-6, The Scripps Research Institute, La Jolla, CA, USA.
¹³ Blood Systems Research Institute, San Francisco, CA, USA.
¹⁴ Department of Laboratory Medicine, University of California, San Francisco, San Francisco, CA, USA.
¹⁵ Departments of Medicine, Biochemistry and Biophysics, and Microbiology, University of California, San Francisco, CA, USA.
¹⁶ Division of Agriculture, Department of Plant Pathology, University of Arkansas System, Fayetteville, AR, USA.
¹⁷ Istituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, Bari, Italy.
¹⁸ Istituto Agronomico Mediterraneo, Valenzano, Italy.
¹⁹ Department of Botany and Plant Pathology, Center for Genome Research and Biocomputing, Oregon State University, Corvallis, OR, USA.
²⁰ Institute of Virology, Charité, Universitätsmedizin Berlin, Corporate Member of Free University Berlin, Berlin Institute of Health, Humboldt-University Berlin, Berlin, Germany.
²¹ Institute of Virology, University of Bonn Medical Centre, Bonn, Germany.
²² German Centre for Infection Research, Braunschweig, Germany.
²³ Institute of Pathogen Biology, Chinese Academy of Medical Sciences, Beijing, China.
²⁴ Department of Molecular Medicine, Mayo Clinic, Rochester, MN, USA.
²⁵ Metabiota, San Francisco, CA, USA.
²⁶ Center of Excellence for Emerging and Zoonotic Animal Disease, Kansas State University, Manhattan, KS, USA.
²⁷ Institut Jacques Monod, CNRS, Université Paris-Diderot, Paris, France.
²⁸ Department of Virology, University of Helsinki, Medicum, Helsinki, Finland.
²⁹ Vetsuisse Faculty, Institute of Veterinary Pathology, University of Zurich, Zurich, Switzerland.
³⁰ Department of Veterinary Biosciences, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland.
³¹ State Key Laboratory of Agromicrobiology, Huazhong Agricultural University, Wuhan, Hubei, China.
³² Division of Plant Pathology, Indian Agricultural Research Institute, New Delhi, India.
³³ Department of Medical Virology, Faculty of Health Sciences, Centre for Viral Zoonoses, University of Pretoria, Pretoria, South Africa.
³⁴ MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Peking Union Medical College, Chinese Academy of Medical Sciences, Beijing, China.
³⁵ Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Beijing, China.
³⁶ Department of Agricultural Biotechnology, Center for Fungal Pathogenesis, College of Agriculture and Life Sciences, Seoul National University, Seoul, Korea.
³⁷ United States Department of Agriculture, Agricultural Research Service, Horticultural Crops Research Laboratory, Corvallis, OR, USA.
³⁸ National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
³⁹ Laboratory of Virology, Department of Plant Sciences, Wageningen University, Wageningen, The Netherlands.
⁴⁰ Department of Microbiology, Institut Pasteur, Paris, France.
⁴¹ Division of Vector-Borne Diseases, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Fort Collins, CO, USA.
⁴² Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC, USA.
⁴³ Mosaic, Yaoundé, Cameroon.
⁴⁴ Department of Pharmacology and Toxicology, School of Medicine, Center for Predictive Medicine for Biodefense and Emerging Infectious Diseases, University of Louisville, Louisville, KY, USA.
⁴⁵ Department of Plant, Soil and Food Sciences, University "Aldo Moro", Bari, Italy.
⁴⁶ Biocentre Klein Flottbek, University of Hamburg, Hamburg, Germany.
⁴⁷ Evandro Chagas Institute, Ministry of Health, Pará, Brazil.
⁴⁸ Department of Pathology, Center for Biodefense and Emerging Infectious Diseases, University of Texas Medical Branch, Galveston, TX, USA.
⁴⁹ United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
⁵⁰ Galveston National Laboratory, University of Texas Medical Branch, Galveston, TX, USA.
⁵¹ Instituto de Biotecnología y Biología Molecular, Centro Cientifico Technológico-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, Universidad Nacional de La Plata, La Plata, Argentina.
⁵² Blueprint Genetics, Helsinki, Finland.
⁵³ Institute of Human Virology, University of Maryland School of Medicine, Baltimore, MD, USA.
⁵⁴ Summerland Research and Development Centre, Agriculture and Agri-Food Canada, Summerland, BC, Canada.
⁵⁵ Department of Planning and Coordination, National Agriculture and Food Research Organization, Tsukuba, Japan.
⁵⁶ Asian Center for Bioresources and Environmental Sciences, University of Tokyo, Tokyo, Japan.
⁵⁷ School of Cellular and Molecular Medicine, University of Bristol, Bristol, UK.
⁵⁸ Department of Microbiology, Immunology and Pathology, Colorado State University, Fort Collins, CO, USA.
⁵⁹ International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, Telangana, India.
⁶⁰ Department of Virology, Helsinki University Hospital, University of Helsinki, Helsinki, Finland.
⁶¹ School of Biological Sciences, University of Queensland, St. Lucia, QLD, Australia.
⁶² Fujian Province Key Laboratory of Plant Virology, Institute of Plant Virology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
⁶³ University of Nebraska Medical Center, Omaha, NE, USA.
⁶⁴ Global Viral, San Francisco, CA, USA.
⁶⁵ Horticultural Crop (Fruit Trees) Biology and Germplasm Creation, Ministry of Agriculture, Wuhan, Hubei, China.
⁶⁶ Key Laboratory of Plant Pathology of Hubei Province, Wuhan, Hubei, China.
⁶⁷ College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China.
⁶⁸ State Key Laboratory for Molecular Virology and Genetic Engineering, Beijing, China.
⁶⁹ National Chung-Hsing University, Taichung City, Taiwan.
⁷⁰ Department of Zoonoses, State Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing, China.
⁷¹ State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China.
⁷² Division of Clinical Research (DCR), Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), B-8200 Research Plaza, Fort Detrick, Frederick, MD, 21702, USA. kuhnjens@mail.nih.gov.

PMID: 29680923
DOI: 10.1007/s00705-018-3843-5

Free article

Taxonomy of the family Arenaviridae and the order Bunyavirales: update 2018

Piet Maes et al. Arch Virol. 2018 Aug.

Free article

. 2018 Aug;163(8):2295-2310.

doi: 10.1007/s00705-018-3843-5. Epub 2018 Apr 21.

Authors

Affiliations

¹ Zoonotic Infectious Diseases Unit, KU Leuven, Leuven, Belgium.
² D. I. Ivanovsky Institute of Virology, N. F. Gamaleya Federal Research Center for Epidemiology and Microbiology, Ministry of Health of the Russian Federation, Moscow, Russia.
³ Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China.
⁴ Institute of Diagnostic Virology, Friedrich-Loeffler-Institut, Greifswald-Insel Riems, Germany.
⁵ Centre for Emerging Zoonotic and Parasitic Diseases, National Institute for Communicable Diseases, National Health Laboratory Service, Sandringham, South Africa.
⁶ Department of Epidemiology, Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, New York, USA.
⁷ Department of Molecular Biology and Biochemistry, University of California, Irvine, CA, USA.
⁸ Arthropod-Borne and Infectious Diseases Laboratory, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, CO, USA.
⁹ Unité des Virus Emergents, Aix-Marseille University, IRD 190, Inserm 1207, IHU Méditerranée Infection, Marseille, France.
¹⁰ Plant Breeding Genetics and Biotechnology Division, International Rice Research Institute, Los Baños, Philippines.
¹¹ Les Mandinaux, Le Grand Madieu, France.
¹² Department of Immunology and Microbial Science, IMM-6, The Scripps Research Institute, La Jolla, CA, USA.
¹³ Blood Systems Research Institute, San Francisco, CA, USA.
¹⁴ Department of Laboratory Medicine, University of California, San Francisco, San Francisco, CA, USA.
¹⁵ Departments of Medicine, Biochemistry and Biophysics, and Microbiology, University of California, San Francisco, CA, USA.
¹⁶ Division of Agriculture, Department of Plant Pathology, University of Arkansas System, Fayetteville, AR, USA.
¹⁷ Istituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, Bari, Italy.
¹⁸ Istituto Agronomico Mediterraneo, Valenzano, Italy.
¹⁹ Department of Botany and Plant Pathology, Center for Genome Research and Biocomputing, Oregon State University, Corvallis, OR, USA.
²⁰ Institute of Virology, Charité, Universitätsmedizin Berlin, Corporate Member of Free University Berlin, Berlin Institute of Health, Humboldt-University Berlin, Berlin, Germany.
²¹ Institute of Virology, University of Bonn Medical Centre, Bonn, Germany.
²² German Centre for Infection Research, Braunschweig, Germany.
²³ Institute of Pathogen Biology, Chinese Academy of Medical Sciences, Beijing, China.
²⁴ Department of Molecular Medicine, Mayo Clinic, Rochester, MN, USA.
²⁵ Metabiota, San Francisco, CA, USA.
²⁶ Center of Excellence for Emerging and Zoonotic Animal Disease, Kansas State University, Manhattan, KS, USA.
²⁷ Institut Jacques Monod, CNRS, Université Paris-Diderot, Paris, France.
²⁸ Department of Virology, University of Helsinki, Medicum, Helsinki, Finland.
²⁹ Vetsuisse Faculty, Institute of Veterinary Pathology, University of Zurich, Zurich, Switzerland.
³⁰ Department of Veterinary Biosciences, Faculty of Veterinary Medicine, University of Helsinki, Helsinki, Finland.
³¹ State Key Laboratory of Agromicrobiology, Huazhong Agricultural University, Wuhan, Hubei, China.
³² Division of Plant Pathology, Indian Agricultural Research Institute, New Delhi, India.
³³ Department of Medical Virology, Faculty of Health Sciences, Centre for Viral Zoonoses, University of Pretoria, Pretoria, South Africa.
³⁴ MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Peking Union Medical College, Chinese Academy of Medical Sciences, Beijing, China.
³⁵ Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Beijing, China.
³⁶ Department of Agricultural Biotechnology, Center for Fungal Pathogenesis, College of Agriculture and Life Sciences, Seoul National University, Seoul, Korea.
³⁷ United States Department of Agriculture, Agricultural Research Service, Horticultural Crops Research Laboratory, Corvallis, OR, USA.
³⁸ National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
³⁹ Laboratory of Virology, Department of Plant Sciences, Wageningen University, Wageningen, The Netherlands.
⁴⁰ Department of Microbiology, Institut Pasteur, Paris, France.
⁴¹ Division of Vector-Borne Diseases, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Fort Collins, CO, USA.
⁴² Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC, USA.
⁴³ Mosaic, Yaoundé, Cameroon.
⁴⁴ Department of Pharmacology and Toxicology, School of Medicine, Center for Predictive Medicine for Biodefense and Emerging Infectious Diseases, University of Louisville, Louisville, KY, USA.
⁴⁵ Department of Plant, Soil and Food Sciences, University "Aldo Moro", Bari, Italy.
⁴⁶ Biocentre Klein Flottbek, University of Hamburg, Hamburg, Germany.
⁴⁷ Evandro Chagas Institute, Ministry of Health, Pará, Brazil.
⁴⁸ Department of Pathology, Center for Biodefense and Emerging Infectious Diseases, University of Texas Medical Branch, Galveston, TX, USA.
⁴⁹ United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, Frederick, MD, USA.
⁵⁰ Galveston National Laboratory, University of Texas Medical Branch, Galveston, TX, USA.
⁵¹ Instituto de Biotecnología y Biología Molecular, Centro Cientifico Technológico-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, Universidad Nacional de La Plata, La Plata, Argentina.
⁵² Blueprint Genetics, Helsinki, Finland.
⁵³ Institute of Human Virology, University of Maryland School of Medicine, Baltimore, MD, USA.
⁵⁴ Summerland Research and Development Centre, Agriculture and Agri-Food Canada, Summerland, BC, Canada.
⁵⁵ Department of Planning and Coordination, National Agriculture and Food Research Organization, Tsukuba, Japan.
⁵⁶ Asian Center for Bioresources and Environmental Sciences, University of Tokyo, Tokyo, Japan.
⁵⁷ School of Cellular and Molecular Medicine, University of Bristol, Bristol, UK.
⁵⁸ Department of Microbiology, Immunology and Pathology, Colorado State University, Fort Collins, CO, USA.
⁵⁹ International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, Telangana, India.
⁶⁰ Department of Virology, Helsinki University Hospital, University of Helsinki, Helsinki, Finland.
⁶¹ School of Biological Sciences, University of Queensland, St. Lucia, QLD, Australia.
⁶² Fujian Province Key Laboratory of Plant Virology, Institute of Plant Virology, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China.
⁶³ University of Nebraska Medical Center, Omaha, NE, USA.
⁶⁴ Global Viral, San Francisco, CA, USA.
⁶⁵ Horticultural Crop (Fruit Trees) Biology and Germplasm Creation, Ministry of Agriculture, Wuhan, Hubei, China.
⁶⁶ Key Laboratory of Plant Pathology of Hubei Province, Wuhan, Hubei, China.
⁶⁷ College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China.
⁶⁸ State Key Laboratory for Molecular Virology and Genetic Engineering, Beijing, China.
⁶⁹ National Chung-Hsing University, Taichung City, Taiwan.
⁷⁰ Department of Zoonoses, State Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Changping, Beijing, China.
⁷¹ State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China.
⁷² Division of Clinical Research (DCR), Integrated Research Facility at Fort Detrick (IRF-Frederick), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), B-8200 Research Plaza, Fort Detrick, Frederick, MD, 21702, USA. kuhnjens@mail.nih.gov.

PMID: 29680923
DOI: 10.1007/s00705-018-3843-5

Abstract

In 2018, the family Arenaviridae was expanded by inclusion of 1 new genus and 5 novel species. At the same time, the recently established order Bunyavirales was expanded by 3 species. This article presents the updated taxonomy of the family Arenaviridae and the order Bunyavirales as now accepted by the International Committee on Taxonomy of Viruses (ICTV) and summarizes additional taxonomic proposals that may affect the order in the near future.

PubMed Disclaimer

MeSH terms

Actions
Actions
Actions
Actions
Actions
Actions
Actions
Actions

Grants and funding

2016YFE0206600/National Key R&D Program of China

LinkOut - more resources

Full Text Sources
- CORE
- Springer
Other Literature Sources
- scite Smart Citations

Save citation to file

Email citation

Add to Collections

Add to My Bibliography

Your saved search

Create a file for external citation management software

Your RSS Feed

Taxonomy of the family Arenaviridae and the order Bunyavirales: update 2018

Affiliations

Taxonomy of the family Arenaviridae and the order Bunyavirales: update 2018

Authors

Affiliations

Abstract

MeSH terms

Grants and funding

LinkOut - more resources

Full Text Sources

Other Literature Sources