[17O]Water and nitric oxide binding by protocatechuate 4,5-dioxygenase and catechol 2,3-dioxygenase. Evidence for binding of exogenous ligands to the active site Fe2+ of extradiol dioxygenases
- PMID: 2997190
[17O]Water and nitric oxide binding by protocatechuate 4,5-dioxygenase and catechol 2,3-dioxygenase. Evidence for binding of exogenous ligands to the active site Fe2+ of extradiol dioxygenases
Abstract
Pseudomonas testosteroni protocatechuate 4,5-dioxygenase and Pseudomonas putida catechol 2,3-dioxygenase (metapyrocatechase) catalyze extradiol-type oxygenolytic cleavage of the aromatic ring of their substrates. The essential active site Fe2+ of each enzyme binds nitric oxide (NO) to produce an EPR active complex with an electronic spin of S = 3/2. Hyperfine broadening of the EPR resonances of the nitrosyl complexes by 17O-enriched H2O shows that water is bound directly to the Fe2+ in the native enzymes, but is apparently displaced in substrate complexes. NO is not displaced by either substrates or inhibitors. The EPR spectra of several enzyme-inhibitor-NO complexes are different from those of enzyme-NO or enzyme-substrate-NO complexes and are found to be broadened by 17O-enriched water. The data show that at least 2 and perhaps 3 sites in the Fe ligation can be occupied by exogenous ligands. Furthermore, it is likely that substrates and inhibitors displace water by binding either at or near to the Fe in the nitrosyl complex. Nitric oxide binding is found to be substrate-dependent for each enzyme. Native catechol 2,3-dioxygenase exhibits KD values of 190 microM and 2.0 mM for NO binding in two types of independent sites. Only one type of site is observed in the catechol complex which exhibits a KD for NO of 3.4 microM. One type of NO binding site is observed for both the native and substrate complexed protocatechuate 4,5-dioxygenase with KD values of 360 and 3 microM, respectively. The presence of a specific site in the Fe coordination for NO which is modified in the substrate complex, suggests that O2 binding by the extradiol dioxygenases may also occur at the Fe.
Similar articles
-
Binding of 17O-labeled substrate and inhibitors to protocatechuate 4,5-dioxygenase-nitrosyl complex. Evidence for direct substrate binding to the active site Fe2+ of extradiol dioxygenases.J Biol Chem. 1986 Feb 15;261(5):2170-8. J Biol Chem. 1986. PMID: 3003098
-
Gentisate 1,2-dioxygenase from Pseudomonas. Substrate coordination to active site Fe2+ and mechanism of turnover.J Biol Chem. 1990 Dec 25;265(36):22187-96. J Biol Chem. 1990. PMID: 2266121
-
EPR and Mössbauer studies of protocatechuate 4,5-dioxygenase. Characterization of a new Fe2+ environment.J Biol Chem. 1983 Dec 25;258(24):14981-91. J Biol Chem. 1983. PMID: 6317682
-
Catechol dioxygenases.Essays Biochem. 1999;34:173-89. doi: 10.1042/bse0340173. Essays Biochem. 1999. PMID: 10730195 Review.
-
Exploring the catalytic mechanism of the extradiol catechol dioxygenases.Biochem Soc Trans. 1997 Feb;25(1):81-5. doi: 10.1042/bst0250081. Biochem Soc Trans. 1997. PMID: 9056848 Review. No abstract available.
Cited by
-
Substrate Promotes Productive Gas Binding in the α-Ketoglutarate-Dependent Oxygenase FIH.Biochemistry. 2016 Jan 19;55(2):277-86. doi: 10.1021/acs.biochem.5b01003. Epub 2016 Jan 5. Biochemistry. 2016. PMID: 26727884 Free PMC article.
-
A hyperactive cobalt-substituted extradiol-cleaving catechol dioxygenase.J Biol Inorg Chem. 2011 Feb;16(2):341-55. doi: 10.1007/s00775-010-0732-0. Epub 2010 Dec 14. J Biol Inorg Chem. 2011. PMID: 21153851 Free PMC article.
-
Activation of α-keto acid-dependent dioxygenases: application of an {FeNO}7/{FeO2}8 methodology for characterizing the initial steps of O2 activation.J Am Chem Soc. 2011 Nov 16;133(45):18148-60. doi: 10.1021/ja202549q. Epub 2011 Oct 21. J Am Chem Soc. 2011. PMID: 21981763 Free PMC article.
-
NO binding to Mn-substituted homoprotocatechuate 2,3-dioxygenase: relationship to O₂ reactivity.J Biol Inorg Chem. 2013 Oct;18(7):717-28. doi: 10.1007/s00775-013-1016-2. Epub 2013 Jul 4. J Biol Inorg Chem. 2013. PMID: 23824380 Free PMC article.
-
Swapping metals in Fe- and Mn-dependent dioxygenases: evidence for oxygen activation without a change in metal redox state.Proc Natl Acad Sci U S A. 2008 May 27;105(21):7347-52. doi: 10.1073/pnas.0711179105. Epub 2008 May 20. Proc Natl Acad Sci U S A. 2008. PMID: 18492808 Free PMC article.
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Medical