Genome Sequences of Rhinovirus Genotype C56 Detected in Three Patients with Acute Respiratory Illness, California, 2016 to 2017

doi:10.1128/MRA.00982-18

. 2018;7(7):e00982-18.

doi: 10.1128/MRA.00982-18. Epub 2018 Aug 23.

Genome Sequences of Rhinovirus Genotype C56 Detected in Three Patients with Acute Respiratory Illness, California, 2016 to 2017

Chao-Yang Pan¹, Shigeo Yagi¹, Tasha Padilla¹, Terry Fei Fan Ng², Rachel L Marine², W Allan Nix², Debra A Wadford¹

Affiliations

¹ Viral and Rickettsial Disease Laboratory, California Department of Public Health, Richmond, California, USA.
² Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.

PMID: 30320303
PMCID: PMC6180327
DOI: 10.1128/MRA.00982-18

Genome Sequences of Rhinovirus Genotype C56 Detected in Three Patients with Acute Respiratory Illness, California, 2016 to 2017

Chao-Yang Pan et al. Microbiol Resour Announc. 2018.

. 2018;7(7):e00982-18.

doi: 10.1128/MRA.00982-18. Epub 2018 Aug 23.

Authors

Chao-Yang Pan¹, Shigeo Yagi¹, Tasha Padilla¹, Terry Fei Fan Ng², Rachel L Marine², W Allan Nix², Debra A Wadford¹

Affiliations

¹ Viral and Rickettsial Disease Laboratory, California Department of Public Health, Richmond, California, USA.
² Division of Viral Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.

PMID: 30320303
PMCID: PMC6180327
DOI: 10.1128/MRA.00982-18

Abstract

We report here two genome sequences of a newly designated rhinovirus genotype, RV-C56, which were obtained from respiratory specimens of three patients with acute respiratory illness in 2016 and 2017. To our knowledge, these sequences represent the first near-complete genomes for RV-C56 strains.

PubMed Disclaimer

Cited by

Designing a multi-epitope vaccine candidate against human rhinovirus C utilizing immunoinformatics approach.
Mamun TI, Ali MA, Hosen MN, Rahman J, Islam MA, Akib MG, Zaman K, Rahman MM, Hossain FMA, Ibenmoussa S, Bourhia M, Dawoud TM. Mamun TI, et al. Front Immunol. 2025 Jan 7;15:1364129. doi: 10.3389/fimmu.2024.1364129. eCollection 2024. Front Immunol. 2025. PMID: 39840071 Free PMC article.
Human rhinovirus promotes STING trafficking to replication organelles to promote viral replication.
Triantafilou M, Ramanjulu J, Booty LM, Jimenez-Duran G, Keles H, Saunders K, Nevins N, Koppe E, Modis LK, Pesiridis GS, Bertin J, Triantafilou K. Triantafilou M, et al. Nat Commun. 2022 Mar 17;13(1):1406. doi: 10.1038/s41467-022-28745-3. Nat Commun. 2022. PMID: 35301296 Free PMC article.
The Emerging Role of Rhinoviruses in Lower Respiratory Tract Infections in Children - Clinical and Molecular Epidemiological Study From Croatia, 2017-2019.
Ljubin-Sternak S, Meštrović T, Ivković-Jureković I, Kolarić B, Slović A, Forčić D, Tot T, Mijač M, Vraneš J. Ljubin-Sternak S, et al. Front Microbiol. 2019 Dec 3;10:2737. doi: 10.3389/fmicb.2019.02737. eCollection 2019. Front Microbiol. 2019. PMID: 31849887 Free PMC article.

References

1. Arden KE, McErlean P, Nissen MD, Sloots TP, Mackay IM. 2006. Frequent detection of human rhinoviruses, paramyxoviruses, coronaviruses, and bocavirus during acute respiratory tract infections. J Med Virol 78:1232–1240. doi:10.1002/jmv.20689. - DOI - PMC - PubMed
1. Lamson D, Renwick N, Kapoor V, Liu Z, Palacios G, Ju J, Dean A, St George K, Briese T, Lipkin WI. 2006. MassTag polymerase-chain-reaction detection of respiratory pathogens, including a new rhinovirus genotype, that caused influenza-like illness in New York state during 2004–2005. J Infect Dis 194:1398–1402. doi:10.1086/508551. - DOI - PMC - PubMed
1. Louie JK, Roy-Burman A, Guardia-Labar L, Boston EJ, Kiang D, Padilla T, Yagi S, Messenger S, Petru AM, Glaser CA, Schnurr DP. 2009. Rhinovirus associated with severe lower respiratory tract infections in children. Pediatr Infect Dis J 28:337–339. doi:10.1097/INF.0b013e31818ffc1b. - DOI - PubMed
1. Lee W-M, Kiesner C, Pappas T, Lee I, Grindle K, Jartti T, Jakiela B, Lemanske RF Jr., Shult PA, Gern JE. 2007. A diverse group of previously unrecognized human rhinoviruses are common causes of respiratory illnesses in infants. PLoS One 2:e966. doi:10.1371/journal.pone.0000966. - DOI - PMC - PubMed
1. McIntyre CL, Knowles NJ, Simmonds P. 2013. Proposals for the classification of human rhinovirus species A, B and C into genotypically assigned types. J Gen Virol 94:1791–1806. doi:10.1099/vir.0.053686-0. - DOI - PMC - PubMed

Grants and funding

LinkOut - more resources

Full Text Sources
Research Materials
- NCI CPTC Antibody Characterization Program

[1] Arden KE, McErlean P, Nissen MD, Sloots TP, Mackay IM. 2006. Frequent detection of human rhinoviruses, paramyxoviruses, coronaviruses, and bocavirus during acute respiratory tract infections. J Med Virol 78:1232–1240. doi:10.1002/jmv.20689. - DOI - PMC - PubMed

[2] Arden KE, McErlean P, Nissen MD, Sloots TP, Mackay IM. 2006. Frequent detection of human rhinoviruses, paramyxoviruses, coronaviruses, and bocavirus during acute respiratory tract infections. J Med Virol 78:1232–1240. doi:10.1002/jmv.20689. - DOI - PMC - PubMed

[3] Lamson D, Renwick N, Kapoor V, Liu Z, Palacios G, Ju J, Dean A, St George K, Briese T, Lipkin WI. 2006. MassTag polymerase-chain-reaction detection of respiratory pathogens, including a new rhinovirus genotype, that caused influenza-like illness in New York state during 2004–2005. J Infect Dis 194:1398–1402. doi:10.1086/508551. - DOI - PMC - PubMed

[4] Lamson D, Renwick N, Kapoor V, Liu Z, Palacios G, Ju J, Dean A, St George K, Briese T, Lipkin WI. 2006. MassTag polymerase-chain-reaction detection of respiratory pathogens, including a new rhinovirus genotype, that caused influenza-like illness in New York state during 2004–2005. J Infect Dis 194:1398–1402. doi:10.1086/508551. - DOI - PMC - PubMed

[5] Louie JK, Roy-Burman A, Guardia-Labar L, Boston EJ, Kiang D, Padilla T, Yagi S, Messenger S, Petru AM, Glaser CA, Schnurr DP. 2009. Rhinovirus associated with severe lower respiratory tract infections in children. Pediatr Infect Dis J 28:337–339. doi:10.1097/INF.0b013e31818ffc1b. - DOI - PubMed

[6] Louie JK, Roy-Burman A, Guardia-Labar L, Boston EJ, Kiang D, Padilla T, Yagi S, Messenger S, Petru AM, Glaser CA, Schnurr DP. 2009. Rhinovirus associated with severe lower respiratory tract infections in children. Pediatr Infect Dis J 28:337–339. doi:10.1097/INF.0b013e31818ffc1b. - DOI - PubMed

[7] Lee W-M, Kiesner C, Pappas T, Lee I, Grindle K, Jartti T, Jakiela B, Lemanske RF Jr., Shult PA, Gern JE. 2007. A diverse group of previously unrecognized human rhinoviruses are common causes of respiratory illnesses in infants. PLoS One 2:e966. doi:10.1371/journal.pone.0000966. - DOI - PMC - PubMed

[8] Lee W-M, Kiesner C, Pappas T, Lee I, Grindle K, Jartti T, Jakiela B, Lemanske RF Jr., Shult PA, Gern JE. 2007. A diverse group of previously unrecognized human rhinoviruses are common causes of respiratory illnesses in infants. PLoS One 2:e966. doi:10.1371/journal.pone.0000966. - DOI - PMC - PubMed

[9] McIntyre CL, Knowles NJ, Simmonds P. 2013. Proposals for the classification of human rhinovirus species A, B and C into genotypically assigned types. J Gen Virol 94:1791–1806. doi:10.1099/vir.0.053686-0. - DOI - PMC - PubMed

[10] McIntyre CL, Knowles NJ, Simmonds P. 2013. Proposals for the classification of human rhinovirus species A, B and C into genotypically assigned types. J Gen Virol 94:1791–1806. doi:10.1099/vir.0.053686-0. - DOI - PMC - PubMed

Save citation to file

Email citation

Add to Collections

Add to My Bibliography

Your saved search

Create a file for external citation management software

Your RSS Feed

Genome Sequences of Rhinovirus Genotype C56 Detected in Three Patients with Acute Respiratory Illness, California, 2016 to 2017

Affiliations

Genome Sequences of Rhinovirus Genotype C56 Detected in Three Patients with Acute Respiratory Illness, California, 2016 to 2017

Authors

Affiliations

Abstract

Similar articles

Cited by

References

Grants and funding

LinkOut - more resources

Full Text Sources

Research Materials

Abstract

Similar articles

Cited by

References

Related information

Grants and funding

LinkOut - more resources

Full Text Sources

Research Materials