Advancing single-cell proteomics and metabolomics with microfluidic technologies
- PMID: 30351310
- DOI: 10.1039/c8an01503a
Advancing single-cell proteomics and metabolomics with microfluidic technologies
Abstract
Recent advances in single-cell analysis have unraveled substantial heterogeneity among seemingly identical cells at genomic and transcriptomic levels. These discoveries have urged scientists to develop new tools that are capable of investigating single cells from a broader set of "omics". Proteomics and metabolomics, for instance, are of particular interest as they are closely correlated with a dynamic picture of cellular behaviors and phenotypic identities. The development of such tools requires highly efficient isolation and processing of a large number of individual cells, where techniques such as microfluidics are extremely useful. Here, we review the recent advances in single-cell proteomics and metabolomics, with a focus on microfluidics-based platforms. We highlight a vast array of emerging microfluidic formats for single-cell isolation and manipulation, and how the state-of-the-art analytical tools are coupled with such platforms for proteomic and metabolomic profiling.
Similar articles
-
Single-Cell Omics Analyses Enabled by Microchip Technologies.Annu Rev Biomed Eng. 2019 Jun 4;21:365-393. doi: 10.1146/annurev-bioeng-060418-052538. Epub 2019 Mar 18. Annu Rev Biomed Eng. 2019. PMID: 30883211 Review.
-
Recent advances in microfluidics for single-cell functional proteomics.Lab Chip. 2023 Mar 28;23(7):1726-1751. doi: 10.1039/d2lc01096h. Lab Chip. 2023. PMID: 36811978 Review.
-
Scaling by shrinking: empowering single-cell 'omics' with microfluidic devices.Nat Rev Genet. 2017 Jun;18(6):345-361. doi: 10.1038/nrg.2017.15. Epub 2017 Apr 10. Nat Rev Genet. 2017. PMID: 28392571 Free PMC article. Review.
-
Defining Cell Identity with Single-Cell Omics.Proteomics. 2018 Sep;18(18):e1700312. doi: 10.1002/pmic.201700312. Epub 2018 May 28. Proteomics. 2018. PMID: 29644800 Free PMC article. Review.
-
Microfluidic single-cell transcriptomics: moving towards multimodal and spatiotemporal omics.Lab Chip. 2021 Oct 12;21(20):3829-3849. doi: 10.1039/d1lc00607j. Lab Chip. 2021. PMID: 34541590 Review.
Cited by
-
Strategies for Development of a Next-Generation Protein Sequencing Platform.Trends Biochem Sci. 2020 Jan;45(1):76-89. doi: 10.1016/j.tibs.2019.09.005. Epub 2019 Oct 30. Trends Biochem Sci. 2020. PMID: 31676211 Free PMC article. Review.
-
New opportunities and challenges of natural products research: When target identification meets single-cell multiomics.Acta Pharm Sin B. 2022 Nov;12(11):4011-4039. doi: 10.1016/j.apsb.2022.08.022. Epub 2022 Aug 27. Acta Pharm Sin B. 2022. PMID: 36386472 Free PMC article. Review.
-
Single cell metabolism: current and future trends.Metabolomics. 2022 Oct 1;18(10):77. doi: 10.1007/s11306-022-01934-3. Metabolomics. 2022. PMID: 36181583 Free PMC article. Review.
-
Hydrogel Microparticles Functionalized with Engineered Escherichia coli as Living Lactam Biosensors.Sensors (Basel). 2019 Dec 16;19(24):5556. doi: 10.3390/s19245556. Sensors (Basel). 2019. PMID: 31888205 Free PMC article.
-
Single-cell lipidomics: protocol development for reliable cellular profiling using capillary sampling.Analyst. 2025 Mar 24;150(7):1261-1270. doi: 10.1039/d5an00037h. Analyst. 2025. PMID: 40052368 Free PMC article.
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources