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Review
. 2019 Jan;105(1):86-91.
doi: 10.1002/cpt.1279.

Essential Characteristics of Pharmacogenomics Study Publications

Affiliations
Review

Essential Characteristics of Pharmacogenomics Study Publications

Caroline F Thorn et al. Clin Pharmacol Ther. 2019 Jan.

Abstract

Pharmacogenomics (PGx) can be seen as a model for biomedical studies: it includes all disease areas of interest and spans in vitro studies to clinical trials, while focusing on the relationships between genes and drugs and the resulting phenotypes. This review will examine different characteristics of PGx study publications and provide examples of excellence in framing PGx questions and reporting their resulting data in a way that maximizes the knowledge that can be built on them.

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Conflict of interest statement

Conflict of interest:

RBA is a stockholder in Personalis Inc. and 23andMe, and a paid advisor for Youscript. MJR is a coinventor on a pending patent application for a genomic prescribing system. SAS is a paid employee of Sema4. HH is a paid employee and stockholder in Translational Software.

Figures

Figure 1.
Figure 1.. Checklist for Authors of a PGx study

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References

    1. Yang SK, Hong M, Baek J, Choi H, Zhao W, Jung Y, et al. A common missense variant in NUDT15 confers susceptibility to thiopurine-induced leukopenia. Nat Genet. 2014. September;46(9):1017–20. PubMed PMID: PMCID: PMC4999337. - PMC - PubMed
    1. Yang JJ, Landier W, Yang W, Liu C, Hageman L, Cheng C, et al. Inherited NUDT15 variant is a genetic determinant of mercaptopurine intolerance in children with acute lymphoblastic leukemia. J Clin Oncol. 2015. April 10;33(11):1235–42. PubMed PMID: PMCID: PMC4375304. - PMC - PubMed
    1. Whirl-Carrillo M, McDonagh EM, Hebert JM, Gong L, Sangkuhl K, Thorn CF, et al. Pharmacogenomics knowledge for personalized medicine. Clin Pharmacol Ther. 2012. October;92(4):414–7. PubMed PMID: PMCID: PMC3660037. - PMC - PubMed
    1. Percha B, Altman RB. Learning the Structure of Biomedical Relationships from Unstructured Text. PLoS Comput Biol. 2015. July;11(7):e1004216 PubMed PMID: PMCID: PMC4517797. - PMC - PubMed
    1. Harrison SM, Dolinsky JS, Knight Johnson AE, Pesaran T, Azzariti DR, Bale S, et al. Clinical laboratories collaborate to resolve differences in variant interpretations submitted to ClinVar. Genet Med. 2017. October;19(10):1096–104. PubMed PMID: PMCID: PMC5600649. - PMC - PubMed

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