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. 2018 Dec 26;140(51):17840-17845.
doi: 10.1021/jacs.8b10134. Epub 2018 Dec 14.

Total Enzyme Syntheses of Napyradiomycins A1 and B1

Affiliations

Total Enzyme Syntheses of Napyradiomycins A1 and B1

Shaun M K McKinnie et al. J Am Chem Soc. .

Abstract

The biosynthetic route to the napyradiomycin family of bacterial meroterpenoids has been fully described 32 years following their original isolation and 11 years after their gene cluster discovery. The antimicrobial and cytotoxic natural products napyradiomycins A1 and B1 are produced using three organic substrates (1,3,6,8-tetrahydroxynaphthalene, dimethylallyl pyrophosphate, and geranyl pyrophosphate), and catalysis via five enzymes: two aromatic prenyltransferases (NapT8 and T9); and three vanadium dependent haloperoxidase (VHPO) homologues (NapH1, H3, and H4). Building upon the previous characterization of NapH1, H3, and T8, we herein describe the initial (NapT9, H1) and final (NapH4) steps required for napyradiomycin construction. This remarkably streamlined biosynthesis highlights the utility of VHPO enzymology in complex natural product generation, as NapH4 efficiently performs a unique chloronium-induced terpenoid cyclization to establish two stereocenters and a new carbon-carbon bond, and dual-acting NapH1 catalyzes chlorination and etherification reactions at two distinct stages of the pathway. Moreover, we employed recombinant napyradiomycin biosynthetic enzymes to chemoenzymatically synthesize milligram quantities in one pot in 1 day. This method represents a viable enantioselective approach to produce complex halogenated metabolites, like napyradiomycin B1, that have yet to be chemically synthesized.

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Conflict of interest statement

Notes

The authors declare no competing financial interest.

Figures

Figure 1
Figure 1
Total chemical syntheses of napyradiomycin A1 and comparison with chemoenzymatic approaches described herein.
Figure 2
Figure 2
NapH4-catalyzed chloronium-mediated cyclization of the geranyl moiety of 2 to form 3.
Figure 3
Figure 3
Negative mode extracted ion chromatograms showing conversion of 1 to 4 (blue trace, 327.1 m/z) and 5 (red trace, 377.1 m/z) by NapT9 and NapH1 activities, respectively.
Figure 4
Figure 4
Chemoenzymatic strategy to the one pot, three-step formation of napyradiomycin biosynthetic intermediates from metabolic precursors.
Scheme 1
Scheme 1
Biosynthetic Pathway from 1,3,6,8-Tetrahydroxynaphthalene (1) to Napyradiomycin B1 (3)

References

    1. Shiomi K; Iinuma H; Hamada M; Naganawa H; Manabe M; Matsuki C; Takeuchi T; Umezawa H Novel antibiotics napyradiomycins. Production, isolation, physico-chemical properties and biological activity. J. Antibiot 1986, 39, 487. - PubMed
    1. Shiomi K; Nakamura H; Iinuma H; Naganawa H; Isshiki K; Takeuchi T; Umezawa H; Iitaka Y Structures of new antibiotics napyradiomycins. J. Antibiot 1986, 39, 494. - PubMed
    1. (a) Shiomi K; Nakamura H; Iinuma H; Naganawa H; Takeuchi T; Umezawa H; Iitaka Y New antibiotic napyradiomycins A2 and B4 and stereochemistry of napyradiomycins. J. Antibiot 1987, 40, 1213. - PubMed
    2. (b) Henkel T; Zeeck A Secondary metabolites by chemical screening. 15. Structure and absolute configuration of naphthomevalin, a new dihydro-naphthoquinone antibiotic from Streptomyces sp. J. Antibiot 1991, 44, 665. - PubMed
    3. (c) Hori Y; Abe Y; Shigematsu N; Goto T; Okuhara M; Kohsaka M Napyradiomycins A and B1: Non-steroidal estrogen-receptor antagonists produced by a Streptomyces. J. Antibiot 1993, 46, 1890. - PubMed
    4. (d) Soria-Mercado IE; Prieto-Davo A; Jensen PR; Fenical W Antibiotic terpenoid chloro-dihydroquinones from a new marine actinomycete. J. Nat. Prod 2005, 68, 904. - PubMed
    5. (e) Motohashi K; Sue M; Furihata K; Ito S; Seto H Terpenoids produced by actinomycetes: Napyradiomycins from Streptomyces antimycoticus NT17. J. Nat. Prod 2008, 71, 595. - PubMed
    6. (f) Haste NM; Farnaes L; Perera VR; Fenical W; Nizet V; Hensler ME Bactericidal kinetics of marine-derived napyradiomycins against contemporary methicillin-resistant Staphylococcus aureus. Mar. Drugs 2011, 9, 680. - PMC - PubMed
    7. (g) Yamamoto K; Tashiro E; Motohashi K; Seto H; Imoto M Napyradiomycin A1, an inhibitor of mitochrondrial complexes I and II. J. Antibiot 2012, 65, 211. - PubMed
    8. (h) Cheng Y-B; Jensen PR; Fenical W Cytotoxic and antimicrobial napyradiomycins from two marine-derived Streptomyces strains. Eur. J. Org. Chem 2013, 2013, 3751. - PMC - PubMed
    9. (i) Wu Z; Li S; Li J; Chen Y; Saurav K; Zhang Q; Zhang H; Zhang W; Zhang W; Zhang S; Zhang C Antibacterial and cytotoxic new napyradiomycins from the marine-derived Streptomyces sp. SCSIO 10428. Mar. Drugs 2013, 11, 2113. - PMC - PubMed
    10. (j) Farnaes L; Coufal NG; Kauffman CA; Rheingold AL; DiPasquale AG; Jensen PR; Fenical W Napyradiomycin derivatives, produced by a marine-derived actinomycete, illustrate cytotoxicity by induction of apoptosis. J. Nat. Prod 2014, 77, 15. - PMC - PubMed
    11. (k) Lacret R; Peŕez-Victoria I; Oves-Costales D; de la Cruz M; Domingo E; Martin J; Díaz C; Vicente F; Genilloud O; Reyes F MDN-0170, a new napyradiomycin from Streptomyces sp. strain CA-271078. Mar. Drugs 2016, 14, 188. - PMC - PubMed
    12. (l) Hwang JS; Kim GJ; Choi HG; Kim MC; Hahn D; Nam J-W; Nam S-J; Kwon HC; Chin J; Cho SJ; Hwang H; Choi H Identification of antiangiogenic potential and cellular mechanisms of napyradiomycin A1 isolated from the marine-derived Streptomyces sp. YP127. J. Nat. Prod 2017, 80, 2269. - PubMed
    1. (a) Takemura S; Hirayama A; Tokunaga J; Kawamura F; Inagaki K; Hashimoto K; Nakata M A concise total synthesis of (±)-A80915G, a member of the napyradiomycin family of antibiotics. Tetrahedron Lett 1999, 40, 7501.
    2. (b) Tatsuta K; Tanaka Y; Kojima M; Ikegami H The first total synthesis of (±)-napyradiomycin A1. Chem. Lett 2002, 31, 14.
    1. Miles ZD; Diethelm S; Pepper HP; Huang DM; George JH; Moore BS A unifying paradigm for naphthoquinone-based meroterpenoid (bio)synthesis. Nat. Chem 2017, 9, 1235. - PMC - PubMed

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