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. 2019 Mar 5;321(9):893-894.
doi: 10.1001/jama.2018.21669.

Next-Generation Sequencing of Infectious Pathogens

Marta Gwinn  1 , Duncan MacCannell  2 , Gregory L Armstrong  2
Affiliations

Next-Generation Sequencing of Infectious Pathogens

Marta Gwinn et al. JAMA. .
No abstract available

PubMed Disclaimer

Conflict of interest statement

Conflicts of Interest:

The authors have no conflicts of interest related to this work.

Figures

Figure :
Figure :
[Slide 1] Workflow transforming pathogen genome sequence data into actionable information. [Slide 2, legend indicating data sources.] [Slide 3] Example: Use of nanopore sequencing to distinguish among possible routes of Ebola virus transmission.
Figure :
Figure :
[Slide 1] Workflow transforming pathogen genome sequence data into actionable information. [Slide 2, legend indicating data sources.] [Slide 3] Example: Use of nanopore sequencing to distinguish among possible routes of Ebola virus transmission.
Figure :
Figure :
[Slide 1] Workflow transforming pathogen genome sequence data into actionable information. [Slide 2, legend indicating data sources.] [Slide 3] Example: Use of nanopore sequencing to distinguish among possible routes of Ebola virus transmission.
See this image and copyright information in PMC

References

    1. Gwinn M, MacCannell DR, Khabbaz RF. Integrating advanced molecular technologies into public health. J Clin Microbiol. 2017;55(3):703–714. - PMC - PubMed
    1. U.S. Centers for Disease Control and Prevention. Advanced Molecular Detection. https://www.cdc.gov/amd. Published October 2016. Accessed June 25, 2018.
    1. American Academy of Microbiology. Applications of clinical microbial next-generation sequencing. https://www.asm.org/index.php/colloquium-reports/item/4462-applications-.... Published February 2016. Accessed June 22, 2018.
    1. Besser J, Carleton HA, Gerner-Smidt P, Lindsey RL, Trees E. Next-generation sequencing technologies and their application to the study and control of bacterial infections. Clin Microbiol Infect. 2018;24(4):335–341. - PMC - PubMed
    1. Quainoo S, Coolen JPM, van Hijum SAFT, et al. Whole-genome sequencing of bacterial pathogens: the future of nosocomial outbreak analysis. Clin Microbiol Rev. 2017;30(4):1015–1063. - PMC - PubMed

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