Author Correction: Best practices for benchmarking germline small-variant calls in human genomes

Peter Krusche¹, Len Trigg², Paul C Boutros³, Christopher E Mason^{4

5

6

7}, Francisco M De La Vega⁸, Benjamin L Moore¹, Mar Gonzalez-Porta¹, Michael A Eberle⁹, Zivana Tezak¹⁰, Samir Lababidi¹¹, Rebecca Truty¹², George Asimenos¹³, Birgit Funke¹⁴, Mark Fleharty¹⁵, Brad A Chapman¹⁶, Marc Salit¹⁷, Justin M Zook¹⁸; Global Alliance for Genomics and Health Benchmarking Team

Affiliations

¹ Illumina Cambridge Ltd, Little Chesterford, UK.
² Real Time Genomics, Hamilton, New Zealand.
³ Ontario Institute for Cancer Research, Toronto, Ontario, Canada.
⁴ Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA.
⁵ The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA.
⁶ The Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, USA.
⁷ The WorldQuant Initiative for Quantitative Prediction, Weill Cornell Medicine, New York, NY, USA.
⁸ Department of Biomedical Data Science, Stanford University School of Medicine, Stanford, CA, USA.
⁹ Illumina Inc., San Diego, CA, USA.
¹⁰ Center for Devices and Radiological Health, FDA, Silver Spring, MD, USA.
¹¹ Office of Health Informatics, Office of the Commissioner, FDA, Silver Spring, MD, USA.
¹² Invitae, San Francisco, CA, USA.
¹³ DNAnexus, San Francisco, CA, USA.
¹⁴ Veritas Genetics, Danvers, MA, USA.
¹⁵ Broad Institute, Cambridge, MA, USA.
¹⁶ Bioinformatics Core, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
¹⁷ Joint Initiative for Metrology in Biology, Stanford University, Stanford, CA, USA.
¹⁸ Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, MD, USA. jzook@nist.gov.

PMID: 30899106
DOI: 10.1038/s41587-019-0108-0

Published Erratum

Author Correction: Best practices for benchmarking germline small-variant calls in human genomes

Peter Krusche et al. Nat Biotechnol. 2019 May.

. 2019 May;37(5):567.

doi: 10.1038/s41587-019-0108-0.

Authors

Affiliations

¹ Illumina Cambridge Ltd, Little Chesterford, UK.
² Real Time Genomics, Hamilton, New Zealand.
³ Ontario Institute for Cancer Research, Toronto, Ontario, Canada.
⁴ Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA.
⁵ The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA.
⁶ The Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, USA.
⁷ The WorldQuant Initiative for Quantitative Prediction, Weill Cornell Medicine, New York, NY, USA.
⁸ Department of Biomedical Data Science, Stanford University School of Medicine, Stanford, CA, USA.
⁹ Illumina Inc., San Diego, CA, USA.
¹⁰ Center for Devices and Radiological Health, FDA, Silver Spring, MD, USA.
¹¹ Office of Health Informatics, Office of the Commissioner, FDA, Silver Spring, MD, USA.
¹² Invitae, San Francisco, CA, USA.
¹³ DNAnexus, San Francisco, CA, USA.
¹⁴ Veritas Genetics, Danvers, MA, USA.
¹⁵ Broad Institute, Cambridge, MA, USA.
¹⁶ Bioinformatics Core, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
¹⁷ Joint Initiative for Metrology in Biology, Stanford University, Stanford, CA, USA.
¹⁸ Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, MD, USA. jzook@nist.gov.

PMID: 30899106
DOI: 10.1038/s41587-019-0108-0

Abstract

In the version of this article initially published online, two pairs of headings were switched with each other in Table 4: "Recall (PCR free)" was switched with "Recall (with PCR)," and "Precision (PCR free)" was switched with "Precision (with PCR)." The error has been corrected in the print, PDF and HTML versions of this article.

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Erratum for

Best practices for benchmarking germline small-variant calls in human genomes.
Krusche P, Trigg L, Boutros PC, Mason CE, De La Vega FM, Moore BL, Gonzalez-Porta M, Eberle MA, Tezak Z, Lababidi S, Truty R, Asimenos G, Funke B, Fleharty M, Chapman BA, Salit M, Zook JM; Global Alliance for Genomics and Health Benchmarking Team. Krusche P, et al. Nat Biotechnol. 2019 May;37(5):555-560. doi: 10.1038/s41587-019-0054-x. Epub 2019 Mar 11. Nat Biotechnol. 2019. PMID: 30858580 Free PMC article.

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Author Correction: Best practices for benchmarking germline small-variant calls in human genomes

Affiliations

Author Correction: Best practices for benchmarking germline small-variant calls in human genomes

Authors

Affiliations

Abstract

Erratum for

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LinkOut - more resources

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