Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2019 Nov;61(6):1371-1384.
doi: 10.1002/bimj.201800007. Epub 2019 Jun 6.

Modeling physical activity data using L0 -penalized expectile regression

Affiliations

Modeling physical activity data using L0 -penalized expectile regression

Norman Wirsik et al. Biom J. 2019 Nov.

Abstract

In recent years accelerometers have become widely used to objectively assess physical activity. Usually intensity ranges are assigned to the measured accelerometer counts by simple cut points, disregarding the underlying activity pattern. Under the assumption that physical activity can be seen as distinct sequence of distinguishable activities, the use of hidden Markov models (HMM) has been proposed to improve the modeling of accelerometer data. As further improvement we propose to use expectile regression utilizing a Whittaker smoother with an L0 -penalty to better capture the intensity levels underlying the observed counts. Different expectile asymmetries beyond the mean allow the distinction of monotonous and more variable activities as expectiles effectively model the complete distribution of the counts. This new approach is investigated in a simulation study, where we simulated 1,000 days of accelerometer data with 1 and 5 s epochs, based on collected labeled data to resemble real-life data as closely as possible. The expectile regression is compared to HMMs and the commonly used cut point method with regard to misclassification rate, number of identified bouts and identified levels as well as the proportion of the estimate being in the range of ±10% of the true activity level. In summary, expectile regression utilizing a Whittaker smoother with an L0 -penalty outperforms HMMs and the cut point method and is hence a promising approach to model accelerometer data.

Keywords: Whittaker smoother; accelerometer; bout detection; hidden Markov model.

PubMed Disclaimer

References

REFERENCES

    1. Andersen, L. B., & Froberg, K. (2015). Advancing the understanding of physical activity and cardiovascular risk factors in children: The European Youth Heart Study (EYHS). British Journal of Sports Medicine, 49, 67-68.
    1. Banda, J. A., Haydel, K. F., Davila, T., Desai, M., Bryson, S., Haskell, W. L., … Robinson, T. N. (2016). Effects of varying epoch lengths, wear time algorithms, and activity cut-points on estimates of child sedentary behavior and physical activity from accelerometer data. Plos One, 11, e0150534.
    1. Eilers, P. (2003). A perfect smoother. Analytical Chemistry, 75, 3631-3636.
    1. Farcomeni, A. (2012). Quantile regression for longitudinal data based on latent Markov subject-specific parameters. Statistics and Computing, 22, 141-152.
    1. Fenske, N., Kneib, T., & Hothorn, T. (2011). Identifying risk factors for severe childhood malnutrition by boosting additive quantile regression. Journal of the American Statistical Association, 106, 494-510.

Publication types