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Comment
. 2019 May 10:15:1176934319848438.
doi: 10.1177/1176934319848438. eCollection 2019.

Evaluation of the Function of Wild Animal Gut Microbiomes Using Next-Generation Sequencing and Bioinformatics and its Relevance to Animal Conservation

Ran Yao  1 , Lianglaing Xu  1 , Guoqing Lu  2 , Lifeng Zhu  1
Affiliations
Comment

Evaluation of the Function of Wild Animal Gut Microbiomes Using Next-Generation Sequencing and Bioinformatics and its Relevance to Animal Conservation

Ran Yao et al. Evol Bioinform Online. .

Abstract

The relationship between animal conservation and the animal gut microbiome is a hot topic in current microbial ecology research. Our group has recently revealed that the occurrence of diverse combinations of gut microbial compositions and functions (metagenomics) in Père David's deer (Elaphurus davidianus) populations is likely to lead to increased evolutionary potential and resilience in response to environmental changes. Thus, considering the effects of diet on the gut microbiome and the importance of a stable gut microbial community to host health, we suggest that a transitional buffer period (with feeding on a regular diet and a diet from the translocation habitat) is needed before animal translocation. When the gut microbiome enters into relatively stable stages and adapts to the new diet from the translocation site, the time is suitable for translocation. Long-term monitoring of the gut microbiomes of translocated animals (by collecting fresh feces and carrying out next-generation sequencing) is still necessary after their translocation.

Keywords: animal translocation; bioinformatics; conservation biology; gut microbiomes; metagenomics; next-generation sequencing.

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Conflict of interest statement

Declaration of Conflicting Interests:The author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.

Figures

Figure 1.
Figure 1.
Père David’s deer gut microbiomes and their relevance to animal conservation (eg, translocation). DFI, core area I (captive) in the Dafeng Natural Reserve; DFII (captive), core area II in the Dafeng Natural Reserve; DFIII, core area III (translocation region) in the Dafeng Natural Reserve. The copyright of the Père David’s deer photograph belongs to Yuhua Ding.
See this image and copyright information in PMC

Comment on

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