Application of Big Data analysis in gastrointestinal research
- PMID: 31293336
- PMCID: PMC6603810
- DOI: 10.3748/wjg.v25.i24.2990
Application of Big Data analysis in gastrointestinal research
Abstract
Big Data, which are characterized by certain unique traits like volume, velocity and value, have revolutionized the research of multiple fields including medicine. Big Data in health care are defined as large datasets that are collected routinely or automatically, and stored electronically. With the rapidly expanding volume of health data collection, it is envisioned that the Big Data approach can improve not only individual health, but also the performance of health care systems. The application of Big Data analysis in the field of gastroenterology and hepatology research has also opened new research approaches. While it retains most of the advantages and avoids some of the disadvantages of traditional observational studies (case-control and prospective cohort studies), it allows for phenomapping of disease heterogeneity, enhancement of drug safety, as well as development of precision medicine, prediction models and personalized treatment. Unlike randomized controlled trials, it reflects the real-world situation and studies patients who are often under-represented in randomized controlled trials. However, residual and/or unmeasured confounding remains a major concern, which requires meticulous study design and various statistical adjustment methods. Other potential drawbacks include data validity, missing data, incomplete data capture due to the unavailability of diagnosis codes for certain clinical situations, and individual privacy. With continuous technological advances, some of the current limitations with Big Data may be further minimized. This review will illustrate the use of Big Data research on gastrointestinal and liver diseases using recently published examples.
Keywords: Colorectal cancer; Epidemiology; Gastric cancer; Gastrointestinal bleeding; Healthcare dataset; Hepatocellular carcinoma; Inflammatory bowel disease.
Conflict of interest statement
Conflict-of-interest statement: WKL has received an honorarium for attending advisory board meetings of Boehringer Ingelheim and Takeda. WKS received honorarium for attending advisory board meetings of AbbVie, Celltrion and Gilead; speaker fees from AbbVie, Astrazeneca, Eisai, Gilead and Ipsen; and research funding from Gilead.
Similar articles
-
Integrative Analysis of Omics Big Data.Methods Mol Biol. 2018;1754:109-135. doi: 10.1007/978-1-4939-7717-8_7. Methods Mol Biol. 2018. PMID: 29536440
-
Big science and big data in nephrology.Kidney Int. 2019 Jun;95(6):1326-1337. doi: 10.1016/j.kint.2018.11.048. Epub 2019 Mar 5. Kidney Int. 2019. PMID: 30982672 Review.
-
Systems biology for nursing in the era of big data and precision health.Nurs Outlook. 2018 May-Jun;66(3):283-292. doi: 10.1016/j.outlook.2017.11.006. Epub 2017 Dec 2. Nurs Outlook. 2018. PMID: 29573828
-
Application of Artificial Intelligence to Gastroenterology and Hepatology.Gastroenterology. 2020 Jan;158(1):76-94.e2. doi: 10.1053/j.gastro.2019.08.058. Epub 2019 Oct 5. Gastroenterology. 2020. PMID: 31593701 Review.
-
Application of artificial intelligence in gastroenterology: Potential role in clinical practice.J Gastroenterol Hepatol. 2021 Feb;36(2):267-272. doi: 10.1111/jgh.15403. J Gastroenterol Hepatol. 2021. PMID: 33624890
Cited by
-
Impact of big data resources on clinicians' activation of prior medical knowledge.Heliyon. 2022 Aug 27;8(9):e10312. doi: 10.1016/j.heliyon.2022.e10312. eCollection 2022 Sep. Heliyon. 2022. PMID: 36105474 Free PMC article.
-
Use of Antibiotics during Immune Checkpoint Inhibitor Treatment Is Associated with Lower Survival in Hepatocellular Carcinoma.Liver Cancer. 2021 Aug 18;10(6):606-614. doi: 10.1159/000518090. eCollection 2021 Nov. Liver Cancer. 2021. PMID: 34950183 Free PMC article.
-
Acute and Severe Acute Pancreatitis and the Effect of Cannabis in States Before and After Legalization Compared With States Without Legalized Cannabis.Pancreas. 2021 May-Jun 01;50(5):766-772. doi: 10.1097/MPA.0000000000001830. Pancreas. 2021. PMID: 34016899 Free PMC article.
-
Prognostic significance of serum inflammation indexes in different Lauren classification of gastric cancer.Cancer Med. 2021 Feb;10(3):1103-1119. doi: 10.1002/cam4.3706. Epub 2021 Jan 6. Cancer Med. 2021. PMID: 33410261 Free PMC article.
-
Baseline neutrophil-to-lymphocyte ratio as a predictor of response to hospitalized bronchiectasis exacerbation risks.Eur Clin Respir J. 2024 Jun 27;11(1):2372901. doi: 10.1080/20018525.2024.2372901. eCollection 2024. Eur Clin Respir J. 2024. PMID: 38946716 Free PMC article.
References
-
- Lohr S. The Origins of 'Big Data': An Etymological Detective Story [cited 25 January 2019]. Available from: https://bits.blogs.nytimes.com/2013/02/01/the-origins-of-big-data-an-ety....
-
- Kitchin R, McArdle G. What makes Big Data, Big Data? Exploring the ontological characteristics of 26 datasets. Big Data Soc. 2016:1–103.
-
- Manyika J, Chui M, Brown B, Bughin J, Dobbs R, Roxburgh C, Byers AH. Big Data: The Next Frontier for Innovation, Competition, and Productivity [cited 25 January 2019). Available from: https://bigdatawg.nist.gov/pdf/MG_big_data_full_report.pdf.
-
- Nickerson DW, Rogers T. Political campaigns and big data. J Econom Perspect. 2014;28:51–74.
-
- Laney D. 3D data management: controlling data volume, velocity and variety [cited 25 January 2019]. Available from: https://blogs.gartner.com/doug-laney/files/2012/01/ad949-3D-Data-Managem....
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources