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. 2019 Jun 13:25:104150.
doi: 10.1016/j.dib.2019.104150. eCollection 2019 Aug.

Plant and fungus transcriptomic data from grapevine berries undergoing artificially-induced noble rot caused by Botrytis cinerea

Arianna Lovato  1 , Sara Zenoni  1 , Giovanni Battista Tornielli  1 , Teresa Colombo  1 , Elodie Vandelle  1 , Annalisa Polverari  1
Affiliations

Plant and fungus transcriptomic data from grapevine berries undergoing artificially-induced noble rot caused by Botrytis cinerea

Arianna Lovato et al. Data Brief. .

Abstract

Noble rot is a latent infection of grape berries caused by the necrotrophic fungus Botrytis cinerea, which develops under specific climatic conditions. The infected berries undergo biochemical and metabolic changes, associated with a rapid withering, which altogether offer interesting organoleptic features to sweet white wines. In this paper, we provide RNAseq datasets (raw and normalized counts as well as differentially expressed genes lists) of the transcriptome profiles of both grapevine berries (Vitis vinifera cv. Garganega) and B. cinerea during the establishment of noble rot, artificially induced in controlled conditions. The sequencing data are available in the NCBI GEO database under accession number GSE116741. These data were exploited in a comprehensive meta-analysis of gene expression during noble rot infection, gray mold and post-harvest withering. This highlighted an important common transcriptional reprogramming in different botrytized grape berry varieties and led to the identification of key genes specifically modulated during noble rot infection, which are described in the article entitled "Specific molecular interactions between Vitis vinifera and Botrytis cinerea are required for noble rot development in grape berries" Lovato et al., 2019.

Keywords: Botrytis cinerea; Grapevine berries; Noble rot; RNA-Seq; Transcriptomic; Vitis vinifera.

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Figures

Fig. 1
Fig. 1
Unsupervised clustering of samples based on V. vinifera cv. Garganega normalized gene counts. Infected.Garganega.berries, grape berries artificially infected in vitro with B. cinerea; Control.Garganega.berries, grape berries water-infiltrated. Numbers 1 to 3 refer to biological replicates.
Fig. 2
Fig. 2
Unsupervised clustering of samples based on B. cinerea normalized gene counts. B.cinerea.in.vitro, B. cinerea mycelium grown in vitro on synthetic medium; infected.Garganega.berries, grape berries artificially infected in vitro with B. cinerea. Numbers 1 to 3 refer to biological replicates.
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