Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Andrew Maltez Thomas^#^{1

2

3}, Paolo Manghi^#¹, Francesco Asnicar¹, Edoardo Pasolli¹, Federica Armanini¹, Moreno Zolfo¹, Francesco Beghini¹, Serena Manara¹, Nicolai Karcher¹, Chiara Pozzi⁴, Sara Gandini⁴, Davide Serrano⁴, Sonia Tarallo⁵, Antonio Francavilla⁵, Gaetano Gallo^{6

7}, Mario Trompetto⁷, Giulio Ferrero⁸, Sayaka Mizutani^{9

10}, Hirotsugu Shiroma⁹, Satoshi Shiba¹¹, Tatsuhiro Shibata^{11

12}, Shinichi Yachida^{11

13}, Takuji Yamada^{9

14}, Jakob Wirbel¹⁵, Petra Schrotz-King¹⁶, Cornelia M Ulrich¹⁷, Hermann Brenner^{16

18

19}, Manimozhiyan Arumugam^{20

21}, Peer Bork^{15

22

23

24}, Georg Zeller¹⁵, Francesca Cordero⁸, Emmanuel Dias-Neto^{3

25}, João Carlos Setubal^{2

26}, Adrian Tett¹, Barbara Pardini^{5

27}, Maria Rescigno²⁸, Levi Waldron^{29

30}, Alessio Naccarati^{5

31}, Nicola Segata³²

Affiliations

¹ Department CIBIO, University of Trento, Trento, Italy.
² Biochemistry Department, Chemistry Institute, University of São Paulo, São Paulo, Brazil.
³ Medical Genomics Laboratory, CIPE/A.C. Camargo Cancer Center, São Paulo, Brazil.
⁴ IEO, European Institute of Oncology IRCCS, Milan, Italy.
⁵ Italian Institute for Genomic Medicine, Turin, Italy.
⁶ Department of Surgical and Medical Sciences, University of Catanzaro, Catanzaro, Italy.
⁷ Department of Colorectal Surgery, Clinica S. Rita, Vercelli, Italy.
⁸ Department of Computer Science, University of Turin, Turin, Italy.
⁹ School of Life Science and Technology, Tokyo Institute of Technology, Tokyo, Japan.
¹⁰ Research Fellow of Japan Society for the Promotion of Science, Tokyo, Japan.
¹¹ Division of Cancer Genomics, National Cancer Center Research Institute, Tokyo, Japan.
¹² Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan.
¹³ Department of Cancer Genome Informatics, Osaka University, Osaka, Japan.
¹⁴ PRESTO, Japan Science and Technology Agency, Saitama, Japan.
¹⁵ Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
¹⁶ Division of Preventive Oncology, National Center for Tumor Diseases and German Cancer Research Center, Heidelberg, Germany.
¹⁷ Huntsman Cancer Institute and Department of Population Health Sciences, University of Utah, Salt Lake City, UT, USA.
¹⁸ Division of Clinical Epidemiology and Aging Research, German Cancer Research Center, Heidelberg, Germany.
¹⁹ German Cancer Consortium, German Cancer Research Center, Heidelberg, Germany.
²⁰ Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
²¹ Faculty of Healthy Sciences, University of Southern Denmark, Odense, Denmark.
²² Molecular Medicine Partnership Unit, Heidelberg, Germany.
²³ Max Delbrück Centre for Molecular Medicine, Berlin, Germany.
²⁴ Department of Bioinformatics, Biocenter, University of Würzburg, Würzburg, Germany.
²⁵ Laboratory of Neurosciences, Institute of Psychiatry, University of São Paulo, São Paulo, Brazil.
²⁶ Biocomplexity Institute of Virginia Tech, Blacksburg, VA, USA.
²⁷ Department of Medical Sciences, University of Turin, Turin, Italy.
²⁸ Mucosal Immunology and Microbiota Unit, Humanitas Research Hospital, Milan, Italy.
²⁹ Graduate School of Public Health and Health Policy, City University of New York, New York, NY, USA.
³⁰ Institute for Implementation Science in Population Health, City University of New York, New York, NY, USA.
³¹ Department of Molecular Biology of Cancer, Institute of Experimental Medicine, Prague, Czech Republic.
³² Department CIBIO, University of Trento, Trento, Italy. nicola.segata@unitn.it.

^# Contributed equally.

PMID: 31664237
DOI: 10.1038/s41591-019-0663-4

Published Erratum

Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Andrew Maltez Thomas et al. Nat Med. 2019 Dec.

. 2019 Dec;25(12):1948.

doi: 10.1038/s41591-019-0663-4.

Authors

Affiliations

¹ Department CIBIO, University of Trento, Trento, Italy.
² Biochemistry Department, Chemistry Institute, University of São Paulo, São Paulo, Brazil.
³ Medical Genomics Laboratory, CIPE/A.C. Camargo Cancer Center, São Paulo, Brazil.
⁴ IEO, European Institute of Oncology IRCCS, Milan, Italy.
⁵ Italian Institute for Genomic Medicine, Turin, Italy.
⁶ Department of Surgical and Medical Sciences, University of Catanzaro, Catanzaro, Italy.
⁷ Department of Colorectal Surgery, Clinica S. Rita, Vercelli, Italy.
⁸ Department of Computer Science, University of Turin, Turin, Italy.
⁹ School of Life Science and Technology, Tokyo Institute of Technology, Tokyo, Japan.
¹⁰ Research Fellow of Japan Society for the Promotion of Science, Tokyo, Japan.
¹¹ Division of Cancer Genomics, National Cancer Center Research Institute, Tokyo, Japan.
¹² Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan.
¹³ Department of Cancer Genome Informatics, Osaka University, Osaka, Japan.
¹⁴ PRESTO, Japan Science and Technology Agency, Saitama, Japan.
¹⁵ Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
¹⁶ Division of Preventive Oncology, National Center for Tumor Diseases and German Cancer Research Center, Heidelberg, Germany.
¹⁷ Huntsman Cancer Institute and Department of Population Health Sciences, University of Utah, Salt Lake City, UT, USA.
¹⁸ Division of Clinical Epidemiology and Aging Research, German Cancer Research Center, Heidelberg, Germany.
¹⁹ German Cancer Consortium, German Cancer Research Center, Heidelberg, Germany.
²⁰ Novo Nordisk Foundation Center for Basic Metabolic Research, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
²¹ Faculty of Healthy Sciences, University of Southern Denmark, Odense, Denmark.
²² Molecular Medicine Partnership Unit, Heidelberg, Germany.
²³ Max Delbrück Centre for Molecular Medicine, Berlin, Germany.
²⁴ Department of Bioinformatics, Biocenter, University of Würzburg, Würzburg, Germany.
²⁵ Laboratory of Neurosciences, Institute of Psychiatry, University of São Paulo, São Paulo, Brazil.
²⁶ Biocomplexity Institute of Virginia Tech, Blacksburg, VA, USA.
²⁷ Department of Medical Sciences, University of Turin, Turin, Italy.
²⁸ Mucosal Immunology and Microbiota Unit, Humanitas Research Hospital, Milan, Italy.
²⁹ Graduate School of Public Health and Health Policy, City University of New York, New York, NY, USA.
³⁰ Institute for Implementation Science in Population Health, City University of New York, New York, NY, USA.
³¹ Department of Molecular Biology of Cancer, Institute of Experimental Medicine, Prague, Czech Republic.
³² Department CIBIO, University of Trento, Trento, Italy. nicola.segata@unitn.it.

^# Contributed equally.

PMID: 31664237
DOI: 10.1038/s41591-019-0663-4

Abstract

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

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Erratum for

Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation.
Thomas AM, Manghi P, Asnicar F, Pasolli E, Armanini F, Zolfo M, Beghini F, Manara S, Karcher N, Pozzi C, Gandini S, Serrano D, Tarallo S, Francavilla A, Gallo G, Trompetto M, Ferrero G, Mizutani S, Shiroma H, Shiba S, Shibata T, Yachida S, Yamada T, Wirbel J, Schrotz-King P, Ulrich CM, Brenner H, Arumugam M, Bork P, Zeller G, Cordero F, Dias-Neto E, Setubal JC, Tett A, Pardini B, Rescigno M, Waldron L, Naccarati A, Segata N. Thomas AM, et al. Nat Med. 2019 Apr;25(4):667-678. doi: 10.1038/s41591-019-0405-7. Epub 2019 Apr 1. Nat Med. 2019. PMID: 30936548 Free PMC article.

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Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Affiliations

Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

Authors

Affiliations

Abstract

Erratum for

Publication types

LinkOut - more resources

Full Text Sources

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Medical