Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2020 Mar:207:107458.
doi: 10.1016/j.pharmthera.2019.107458. Epub 2019 Dec 18.

Circulating tumor DNA as an early cancer detection tool

Affiliations
Review

Circulating tumor DNA as an early cancer detection tool

Andrea Campos-Carrillo et al. Pharmacol Ther. 2020 Mar.

Abstract

Circulating tumor DNA holds substantial promise as an early detection biomarker, particularly for cancers that do not have currently accepted screening methodologies, such as ovarian, pancreatic, and gastric cancers. Many features intrinsic to ctDNA analysis may be leveraged to enhance its use as an early cancer detection biomarker: including ctDNA fragment lengths, DNA copy number variations, and associated patient phenotypic information. Furthermore, ctDNA testing may be synergistically used with other multi-omic biomarkers to enhance early detection. For instance, assays may incorporate early detection proteins (i.e., CA-125), epigenetic markers, circulating tumor RNA, nucleosomes, exosomes, and associated immune markers. Many companies are currently competing to develop a marketable early cancer detection test that leverages ctDNA. Although some hurdles (like early stage disease assay accuracy, high implementation costs, confounding from clonal hematopoiesis, and lack of clinical utility studies) need to be addressed before integration into healthcare, ctDNA assays hold substantial potential as an early cancer screening test.

Keywords: Cancer detection; Cancer screening; Cell-free DNA; Circulating tumor DNA; Early detection.

PubMed Disclaimer

Conflict of interest statement

Declaration of Competing Interest MM is an inventor on patent applications covering technologies described herein. SWG is a consultant to Grail, Inc. Laura Goetz holds an equity position in Q Bio, Inc. All other authors declare no conflicts of interest.

Figures

Figure 1.
Figure 1.
Synergistic inclusion of both intrinsic variables with multi-omic technologies may enhance circulating tumor DNA as a tool for early cancer detection. A patient with an undiagnosed lung cancer is shown. Phenotypic variables in this case could include age and smoking status to help inform the prior probability of lung adenocarcinoma.

References

    1. Abbosh C, Birkbak NJ, Wilson GA, Jamal-Hanjani M, Constantin T, Salari R, Le Quesne J, Moore DA, Veeriah S, Rosenthal R, Marafioti T, Kirkizlar E, Watkins TBK, McGranahan N, Ward S, Martinson L, Riley J, Fraioli F, Al Bakir M, Grönroos E, Zambrana F, Endozo R, Bi WL, Fennessy FM, Sponer N, Johnson D, Laycock J, Shafi S, Czyzewska-Khan J, Rowan A, Chambers T, Matthews N, Turajlic S, Hiley C, Lee SM, Forster MD, Ahmad T, Falzon M, Borg E, Lawrence D, Hayward M, Kolvekar S, Panagiotopoulos N, Janes SM, Thakrar R, Ahmed A, Blackhall F, Summers Y, Hafez D, Naik A, Ganguly A, Kareht S, Shah R, Joseph L, Marie Quinn A, Crosbie PA, Naidu B, Middleton G, Langman G, Trotter S, Nicolson M, Remmen H, Kerr K, Chetty M, Gomersall L, Fennell DA, Nakas A, Rathinam S, Anand G, Khan S, Russell P, Ezhil V, Ismail B, Irvin-Sellers M, Prakash V, Lester JF, Kornaszewska M, Attanoos R, Adams H, Davies H, Oukrif D, Akarca AU, Hartley JA, Lowe HL, Lock S, Iles N, Bell H, Ngai Y, Elgar G, Szallasi Z, Schwarz RF, Herrero J, Stewart A, Quezada SA, Peggs KS, Van Loo P, Dive C, Lin CJ, Rabinowitz M, Aerts HJWL, Hackshaw A, Shaw JA, Zimmermann BG, The T. c., Swanton C, Jamal-Hanjani M, Abbosh C, Veeriah S, Shafi S, Czyzewska-Khan J, Johnson D, Laycock J, Bosshard-Carter L, Goh G, Rosenthal R, Gorman P, Murugaesu N, Hynds RE, Wilson GA, Birkbak NJ, Watkins TBK, McGranahan N, Horswell S, Bakir MA, Grönroos E, Mitter R, Escudero M, Stewart A, Van Loo P, Rowan A, Xu H, Turajlic S, Hiley C, Goldman J, Stone RK, Denner T, Matthews N, Elgar G, Ward S, Biggs J, Costa M, Begum S, Phillimore B, Chambers T, Nye E, Graca S, Joshi K, Furness A, Ben Aissa A, Wong YNS, Georgiou A, Quezada SA, Peggs KS, Hartley JA, Lowe HL, Herrero J, Lawrence D, Hayward M, Panagiotopoulos N, Kolvekar S, Falzon M, Borg E, Marafioti T, Simeon C, Hector G, Smith A, Aranda M, Novelli M, Oukrif D, Akarca AU, Janes SM, Thakrar R, Forster MD, Ahmad T, Lee SM, Papadatos-Pastos D, Carnell D, Mendes R, George J, Navani N, Ahmed A, Taylor M, Choudhary J, Summers Y, Califano R, Taylor P, Shah R, Krysiak P, Rammohan K, Fontaine E, Booton R, Evison M, Crosbie PA, Moss S, Idries F, Joseph L, Bishop P, Chaturvedi A, Quinn AM, Doran H, Leek A, Harrison P, Moore K, Waddington R, Novasio J, Blackhall F, Rogan J, Smith E, Dive C, Tugwood J, Brady G, Rothwell DG, Chemi F, Pierce J, Gulati S, Naidu B, Langman G, Trotter S, Bellamy M, Bancroft H, Kerr A, Kadiri S, Webb J, Middleton G, Djearaman M, Fennell DA, Shaw JA, Quesne JL, Moore DA, Thomas A, Walter H, Riley J, Martinson L, Nakas A, Rathinam S, Monteiro W, Marshall H, Nelson L, Bennett J, Primrose L, Anand G, Khan S, Amadi A, Nicolson M, Kerr K, Palmer S, Remmen H, Miller J, Buchan K, Chetty M, Gomersall L, Lester JF, Edwards A, Morgan F, Adams H, Davies H, Kornaszewska M, Attanoos R, Lock S, Verjee A, MacKenzie M, Wilcox M, Bell H, Iles N, Hackshaw A, Ngai Y, Smith S, Gower N, Ottensmeier C, Chee S, Johnson B, Alzetani A, Shaw E, Lim E, De Sousa P, Barbosa MT, Bowman A, Jordan S, Rice A, Raubenheimer H, Proli C, Cufari ME, Ronquillo JC, Kwayie A, Bhayani H, Hamilton M, Bakar Y, Mensah N, Ambrose L, Devaraj A, Buderi S, Finch J, Azcarate L, Chavan H, Green S, Mashinga H, Nicholson AG, Lau K, Sheaff M, Schmid P, Conibear J, Ezhil V, Ismail B, Irvin-Sellers M, Prakash V, Russell P, Light T, Horey T, Danson S, Bury J, Edwards J, Hill J, Matthews S, Kitsanta Y, Suvarna K, Fisher P, Keerio AD, Shackcloth M, Gosney J, Postmus P, Feeney S, Asante-Siaw J, Constantin T, Salari R, Sponer N, Naik A, Zimmermann BG, Rabinowitz M, Aerts HJWL, Dentro S, Dessimoz C, The P. c., & Swanton C (2017). Phylogenetic ctDNA analysis depicts early-stage lung cancer evolution. Nature, 545, 446. - PMC - PubMed
    1. Abbosh C, Birkbak NJ, Wilson GA, Jamal-Hanjani M, Constantin T, Salari R, Le Quesne J, Moore DA, Veeriah S, Rosenthal R, Marafioti T, Kirkizlar E, Watkins TBK, McGranahan N, Ward S, Martinson L, Riley J, (2017). Phylogenetic ctDNA analysis depicts early-stage lung cancer evolution. Nature, 545, 446. - PMC - PubMed
    1. Abusamra AJ, Zhong Z, Zheng X, Li M, Ichim TE, Chin JL, & Min WP (2005). Tumor exosomes expressing Fas ligand mediate CD8+ T-cell apoptosis. Blood Cells Mol Dis, 35, 169–173. - PubMed
    1. Aggarwal C, Thompson JC, Black TA, Katz SI, Fan R, Yee SS, Chien AL, Evans TL, Bauml JM, Alley EW, Ciunci CA, Berman AT, Cohen RB, Lieberman DB, Majmundar KS, Savitch SL, Morrissette JJD, Hwang W-T, Elenitoba-Johnson KSJ, Langer CJ, & Carpenter EL (2019). Clinical Implications of Plasma-Based Genotyping With the Delivery of Personalized Therapy in Metastatic Non–Small Cell Lung CancerPlasma-Based Genotyping for Personalized Therapy in Metastatic Non–Small Cell Lung CancerPlasma-Based Genotyping for Personalized Therapy in Metastatic Non–Small Cell Lung Cancer. JAMA Oncol, 5, 173–180. - PMC - PubMed
    1. Amant F, Verheecke M, Wlodarska I, Dehaspe L, Brady P, Brison N, Van Den Bogaert K, Dierickx D, Vandecaveye V, Tousseyn T, Moerman P, Vanderstichele A, Vergote I, Neven P, Berteloot P, Putseys K, Danneels L, Vandenberghe P, Legius E, & Vermeesch JR (2015). Presymptomatic Identification of Cancers in Pregnant Women During Noninvasive Prenatal Testing. JAMA Oncol, 1, 814–819. - PubMed

Publication types

Substances