Evolution of the novel coronavirus from the ongoing Wuhan outbreak and modeling of its spike protein for risk of human transmission

doi:10.1007/s11427-020-1637-5

. 2020 Mar;63(3):457-460.

doi: 10.1007/s11427-020-1637-5. Epub 2020 Jan 21.

Evolution of the novel coronavirus from the ongoing Wuhan outbreak and modeling of its spike protein for risk of human transmission

Xintian Xu¹, Ping Chen^{2

3}, Jingfang Wang⁴, Jiannan Feng⁵, Hui Zhou², Xuan Li⁶, Wu Zhong⁷, Pei Hao^{8

9

10}

Affiliations

¹ Key Laboratory of Molecular Virology and Immunology, Institut Pasteur of Shanghai, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Shanghai, 200031, China.
² Key Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China.
³ The Joint Program in Infection and Immunity: Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, 510623, China.
⁴ Key Laboratory of Systems Biomedicine, Ministry of Education, Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai, 200240, China.
⁵ National Engineering Research Center for the Emergence Drugs, Beijing Institute of Pharmacology and Toxicology, Beijing, 100850, China.
⁶ Key Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. lixuan@sippe.ac.cn.
⁷ National Engineering Research Center for the Emergence Drugs, Beijing Institute of Pharmacology and Toxicology, Beijing, 100850, China. zhongwu@bmi.ac.cn.
⁸ Key Laboratory of Molecular Virology and Immunology, Institut Pasteur of Shanghai, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Shanghai, 200031, China. phao@ips.ac.cn.
⁹ The Joint Program in Infection and Immunity: Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, 510623, China. phao@ips.ac.cn.
¹⁰ The Joint Program in Infection and Immunity: Institute Pasteur of Shanghai, Chinese Academy of Sciences, Shanghai, 200031, China. phao@ips.ac.cn.

PMID: 32009228
PMCID: PMC7089049
DOI: 10.1007/s11427-020-1637-5

Evolution of the novel coronavirus from the ongoing Wuhan outbreak and modeling of its spike protein for risk of human transmission

Xintian Xu et al. Sci China Life Sci. 2020 Mar.

. 2020 Mar;63(3):457-460.

doi: 10.1007/s11427-020-1637-5. Epub 2020 Jan 21.

Authors

Xintian Xu¹, Ping Chen^{2

3}, Jingfang Wang⁴, Jiannan Feng⁵, Hui Zhou², Xuan Li⁶, Wu Zhong⁷, Pei Hao^{8

9

10}

Affiliations

¹ Key Laboratory of Molecular Virology and Immunology, Institut Pasteur of Shanghai, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Shanghai, 200031, China.
² Key Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China.
³ The Joint Program in Infection and Immunity: Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, 510623, China.
⁴ Key Laboratory of Systems Biomedicine, Ministry of Education, Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai, 200240, China.
⁵ National Engineering Research Center for the Emergence Drugs, Beijing Institute of Pharmacology and Toxicology, Beijing, 100850, China.
⁶ Key Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. lixuan@sippe.ac.cn.
⁷ National Engineering Research Center for the Emergence Drugs, Beijing Institute of Pharmacology and Toxicology, Beijing, 100850, China. zhongwu@bmi.ac.cn.
⁸ Key Laboratory of Molecular Virology and Immunology, Institut Pasteur of Shanghai, Center for Biosafety Mega-Science, Chinese Academy of Sciences, Shanghai, 200031, China. phao@ips.ac.cn.
⁹ The Joint Program in Infection and Immunity: Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, 510623, China. phao@ips.ac.cn.
¹⁰ The Joint Program in Infection and Immunity: Institute Pasteur of Shanghai, Chinese Academy of Sciences, Shanghai, 200031, China. phao@ips.ac.cn.

PMID: 32009228
PMCID: PMC7089049
DOI: 10.1007/s11427-020-1637-5

No abstract available

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Conflict of interest statement

Compliance and ethics The author(s) declare that they have no conflict of interest.

Comment in

Biophotonics in Health Care and Its Relevance in Fighting the Coronavirus Disease.
Brugnera Junior A, Zanin F, Nammour S, Groisman S. Brugnera Junior A, et al. Photobiomodul Photomed Laser Surg. 2020 Sep;38(9):521-523. doi: 10.1089/photob.2020.4883. Photobiomodul Photomed Laser Surg. 2020. PMID: 32936069 No abstract available.

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References

1. CDC . 2019 Novel Coronavirus (2019-nCoV), Wuhan, China. 2020.
1. Cotten M, Watson SJ, Kellam P, Al-Rabeeah AA, Makhdoom HQ, Assiri A, Al-Tawfiq JA, Alhakeem RF, Madani H, AlRabiah F A, et al. Transmission and evolution of the Middle East respiratory syndrome coronavirus in Saudi Arabia: a descriptive genomic study. Lancet. 2013;382:1993–2002. doi: 10.1016/S0140-6736(13)61887-5. - DOI - PMC - PubMed
1. Hu B, Zeng LP, Yang XL, Ge XY, Zhang W, Li B, Xie JZ, Shen XR, Zhang YZ, Wang N, et al. Discovery of a rich gene pool of bat SARS-related coronaviruses provides new insights into the origin of SARS coronavirus. PLoS Pathog. 2017;13:e1006698. doi: 10.1371/journal.ppat.1006698. - DOI - PMC - PubMed
1. Li F. Evidence for a common evolutionary origin of coronavirus spike protein receptor-binding subunits. J Virol. 2012;86:2856–2858. doi: 10.1128/JVI.06882-11. - DOI - PMC - PubMed
1. Li F, Li W, Farzan M, Harrison SC. Structure of SARS coronavirus spike receptor-binding domain complexed with receptor. Science. 2005;309:1864–1868. doi: 10.1126/science.1116480. - DOI - PubMed

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[1] CDC . 2019 Novel Coronavirus (2019-nCoV), Wuhan, China. 2020.

[2] CDC . 2019 Novel Coronavirus (2019-nCoV), Wuhan, China. 2020.

[3] Cotten M, Watson SJ, Kellam P, Al-Rabeeah AA, Makhdoom HQ, Assiri A, Al-Tawfiq JA, Alhakeem RF, Madani H, AlRabiah F A, et al. Transmission and evolution of the Middle East respiratory syndrome coronavirus in Saudi Arabia: a descriptive genomic study. Lancet. 2013;382:1993–2002. doi: 10.1016/S0140-6736(13)61887-5. - DOI - PMC - PubMed

[4] Cotten M, Watson SJ, Kellam P, Al-Rabeeah AA, Makhdoom HQ, Assiri A, Al-Tawfiq JA, Alhakeem RF, Madani H, AlRabiah F A, et al. Transmission and evolution of the Middle East respiratory syndrome coronavirus in Saudi Arabia: a descriptive genomic study. Lancet. 2013;382:1993–2002. doi: 10.1016/S0140-6736(13)61887-5. - DOI - PMC - PubMed

[5] Hu B, Zeng LP, Yang XL, Ge XY, Zhang W, Li B, Xie JZ, Shen XR, Zhang YZ, Wang N, et al. Discovery of a rich gene pool of bat SARS-related coronaviruses provides new insights into the origin of SARS coronavirus. PLoS Pathog. 2017;13:e1006698. doi: 10.1371/journal.ppat.1006698. - DOI - PMC - PubMed

[6] Hu B, Zeng LP, Yang XL, Ge XY, Zhang W, Li B, Xie JZ, Shen XR, Zhang YZ, Wang N, et al. Discovery of a rich gene pool of bat SARS-related coronaviruses provides new insights into the origin of SARS coronavirus. PLoS Pathog. 2017;13:e1006698. doi: 10.1371/journal.ppat.1006698. - DOI - PMC - PubMed

[7] Li F. Evidence for a common evolutionary origin of coronavirus spike protein receptor-binding subunits. J Virol. 2012;86:2856–2858. doi: 10.1128/JVI.06882-11. - DOI - PMC - PubMed

[8] Li F. Evidence for a common evolutionary origin of coronavirus spike protein receptor-binding subunits. J Virol. 2012;86:2856–2858. doi: 10.1128/JVI.06882-11. - DOI - PMC - PubMed

[9] Li F, Li W, Farzan M, Harrison SC. Structure of SARS coronavirus spike receptor-binding domain complexed with receptor. Science. 2005;309:1864–1868. doi: 10.1126/science.1116480. - DOI - PubMed

[10] Li F, Li W, Farzan M, Harrison SC. Structure of SARS coronavirus spike receptor-binding domain complexed with receptor. Science. 2005;309:1864–1868. doi: 10.1126/science.1116480. - DOI - PubMed

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Evolution of the novel coronavirus from the ongoing Wuhan outbreak and modeling of its spike protein for risk of human transmission

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Evolution of the novel coronavirus from the ongoing Wuhan outbreak and modeling of its spike protein for risk of human transmission

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