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. 2020 Mar 5;21(5):1776.
doi: 10.3390/ijms21051776.

A Possible Link of Genetic Variations in ER/IGF1R Pathway and Risk of Melanoma

Tze-An Yuan  1 , Vandy Yourk  2 , Ali Farhat  3 , Katherine L Guo  4 , Angela Garcia  5 , Frank L Meyskens  1   5   6 , Feng Liu-Smith  5   6   7
Affiliations

A Possible Link of Genetic Variations in ER/IGF1R Pathway and Risk of Melanoma

Tze-An Yuan et al. Int J Mol Sci. .

Abstract

The mechanism of gender disparity in cutaneous melanoma incidence remains unclear. Steroid hormones including estrogens have long been implicated in the course of melanoma, but the conclusion is controversial. Estrogen receptors (ERs) and insulin-like growth factor 1 receptor (IGF1R) show extensive crosstalk in cancer development, but how the ER/IGF1R network impacts melanoma is currently unclear. Here we studied the melanoma associations of selected SNPs from the ER/IGF1R network. Part of the International Genes, Environment, and Melanoma (GEM) cohort was used as a discovery set, and the Gene Environment Association Studies Initiative (GENEVA) dataset served as a validation set. Based on the associations with other malignant disease conditions, thirteen single nucleotide polymorphism (SNP) variants in ESR1, ESR2, IGF1, and IGF1R were selected for candidate gene association analyses. The rs1520220 in IGF1 and rs2229765 in IGF1R variants were significantly associated with melanoma risk in the GEM dataset after Benjamini-Hochberg multiple comparison correction, although they were not validated in the GENEVA set. The discrepancy may be caused by the multiple melanoma characteristics in the GEM patients. Further analysis of gender disparity was carried out for IGF1 and IGF1R SNPs in the GEM dataset. The GG phenotype in IGF1 rs1520220 (recessive model) presented an increased risk of melanoma (OR = 8.11, 95% CI: 2.20, 52.5, p = 0.006) in men but a significant opposite effect in women (OR = 0.15, 95% CI: 0.018, 0.86, p = 0.045). The AA genotype in IGF1R rs2229765 (recessive model) showed a significant protective effect in men (OR = 0.24, 95% CI: 0.07, 0.64, p = 0.008) and no effect in women. Results from the current study are warranted for further validation.

Keywords: cutaneous melanoma; estrogen receptors; gender disparities; genetic variants; insulin-like growth factor 1; insulin-like growth factor 1 receptor.

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Conflict of interest statement

The authors declare no conflicts of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, or in the decision to publish the results.

Figures

Figure 1
Figure 1
eQTL of the 4 genes and 3 SNPs in skin tissues. (A). Multiple gene queries in skin tissues. (B). Violin plot of each SNP (underlined rs numbers) in sun-exposed and not-exposed skin. Sun-exposed skin was derived from lower legs, while not-exposed skin was obtained from suprapubic areas. Data analysis was performed using GTEx Portal and included tissue-specific mRNA expression information provided by the website (https://gtexportal.org/home/).
See this image and copyright information in PMC

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