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. 2020 Jun 12;7(1):181.
doi: 10.1038/s41597-020-0523-6.

CIDO, a community-based ontology for coronavirus disease knowledge and data integration, sharing, and analysis

Yongqun He  1 , Hong Yu  2   3 , Edison Ong  4 , Yang Wang  4   2   3 , Yingtong Liu  4 , Anthony Huffman  4 , Hsin-Hui Huang  4   5 , John Beverley  6 , Junguk Hur  7 , Xiaolin Yang  8 , Luonan Chen  9   10 , Gilbert S Omenn  4 , Brian Athey  4 , Barry Smith  11
Affiliations

CIDO, a community-based ontology for coronavirus disease knowledge and data integration, sharing, and analysis

Yongqun He et al. Sci Data. .

Abstract

The Coronavirus Infectious Disease Ontology (CIDO) is a community-based ontology that supports coronavirus disease knowledge and data standardization, integration, sharing, and analysis.

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Conflict of interest statement

The authors declare no competing interests.

Figures

Fig. 1
Fig. 1
The design pattern of CIDO for logically representing and linking different components related to a coronavirus disease, e.g., COVID-19. The terms presented in the figure are generated in CIDO or imported by CIDO from other ontologies. To reduce complexity, the ontology sources of the terms are not labeled.
See this image and copyright information in PMC

References

    1. Xu R. Chance missed, but still there! Memoirs at the 10(th) anniversary of 2003 SARS outbreak. J. Thorac. Dis. 2013;5(Suppl 2):S90–93. - PMC - PubMed
    1. Bernard-Stoecklin S, et al. Comparative Analysis of Eleven Healthcare-Associated Outbreaks of Middle East Respiratory Syndrome Coronavirus (Mers-Cov) from 2015 to 2017. Sci. Rep. 2019;9:7385. doi: 10.1038/s41598-019-43586-9. - DOI - PMC - PubMed
    1. Barrett T, et al. NCBI GEO: archive for functional genomics data sets–update. Nucleic Acids Res. 2013;41:D991–995. doi: 10.1093/nar/gks1193. - DOI - PMC - PubMed
    1. Higdon R, et al. Unraveling the Complexities of Life Sciences Data. Big Data. 2013;1:42–50. doi: 10.1089/big.2012.1505. - DOI - PubMed
    1. Ashburner M, et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat. Genet. 2000;25:25–29. doi: 10.1038/75556. - DOI - PMC - PubMed

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