SARS-CoV-2 detection, viral load and infectivity over the course of an infection
- PMID: 32615199
- PMCID: PMC7323671
- DOI: 10.1016/j.jinf.2020.06.067
SARS-CoV-2 detection, viral load and infectivity over the course of an infection
Abstract
Objectives: To summarise the evidence on the detection pattern and viral load of SARS-CoV-2 over the course of an infection (including any asymptomatic or pre-symptomatic phase), and the duration of infectivity.
Methods: A systematic literature search was undertaken in PubMed, Europe PubMed Central and EMBASE from 30 December 2019 to 12 May 2020.
Results: We identified 113 studies conducted in 17 countries. The evidence from upper respiratory tract samples suggests that the viral load of SARS-CoV-2 peaks around symptom onset or a few days thereafter, and becomes undetectable about two weeks after symptom onset; however, viral loads from sputum samples may be higher, peak later and persist for longer. There is evidence of prolonged virus detection in stool samples, with unclear clinical significance. No study was found that definitively measured the duration of infectivity; however, patients may not be infectious for the entire duration of virus detection, as the presence of viral ribonucleic acid may not represent transmissible live virus.
Conclusion: There is a relatively consistent trajectory of SARS-CoV-2 viral load over the course of COVID-19 from respiratory tract samples, however the duration of infectivity remains uncertain.
Keywords: COVID-19; Coronavirus; Infectivity; RNA; Review; SARS-CoV-2; Viral load.
Copyright © 2020. Published by Elsevier Ltd.
Conflict of interest statement
Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
Comment in
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Positive RT-PCR nasopharyngeal swab in patients recovered from COVID-19 disease: When does quarantine really end?J Infect. 2020 Dec;81(6):e1-e3. doi: 10.1016/j.jinf.2020.08.034. Epub 2020 Aug 25. J Infect. 2020. PMID: 32853596 Free PMC article. No abstract available.
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Ct values from SARS-CoV-2 diagnostic PCR assays should not be used as direct estimates of viral load.J Infect. 2021 Mar;82(3):414-451. doi: 10.1016/j.jinf.2020.10.017. Epub 2020 Oct 24. J Infect. 2021. PMID: 33131699 Free PMC article.
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SARS-CoV-2 RNAemia is associated with severe chronic underlying diseases but not with nasopharyngeal viral load.J Infect. 2021 Mar;82(3):e38-e41. doi: 10.1016/j.jinf.2020.11.024. Epub 2020 Nov 26. J Infect. 2021. PMID: 33248220 Free PMC article. No abstract available.
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Developing a multivariable risk prediction model to predict prolonged viral clearance in patients with COVID-19.J Infect. 2021 Apr;82(4):e20-e22. doi: 10.1016/j.jinf.2020.12.026. Epub 2020 Dec 31. J Infect. 2021. PMID: 33387568 Free PMC article. No abstract available.
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Duration of culturable SARS-CoV-2 within different specimens among mild and severe COVID-19 patients: A longitudinal study.J Infect. 2021 Jul;83(1):e29-e31. doi: 10.1016/j.jinf.2021.04.025. Epub 2021 Apr 28. J Infect. 2021. PMID: 33932450 Free PMC article. No abstract available.
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Initial viral load and decay kinetics of SARS-CoV-2 lineage B.1.1.7 in the upper respiratory tract of adults and children.J Infect. 2021 Oct;83(4):496-522. doi: 10.1016/j.jinf.2021.08.015. Epub 2021 Aug 11. J Infect. 2021. PMID: 34390756 Free PMC article. No abstract available.
References
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- Lorenc T., Khouja C., Raine G., Sutcliffe K., Wright K., Sowden A. EPPI-Centre, Social Science Research Unit, UCL Institute of Education, University College London; London: 2020. COVID-19: living map of the evidence.
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