An official website of the United States government
The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before
sharing sensitive information, make sure you’re on a federal
government site.
The site is secure.
The https:// ensures that you are connecting to the
official website and that any information you provide is encrypted
and transmitted securely.
1 Clinical Bacteriology and Mycology, Laboratory Medicine, University Hospital Basel and University of Basel, Basel, Switzerland.
2 Clinical Virology, Laboratory Medicine, University Hospital Basel, Basel, Switzerland.
3 Clinical Bacteriology and Mycology, Laboratory Medicine, University Hospital Basel and University of Basel, Basel, Switzerland; Applied Microbiology Research, Laboratory Medicine, Department Biomedicine, University of Basel, Basel, Switzerland.
4 Applied Microbiology Research, Laboratory Medicine, Department Biomedicine, University of Basel, Basel, Switzerland.
5 Laboratory Medicine, University Hospital Basel, Basel, Switzerland.
6 Clinical Virology, Laboratory Medicine, University Hospital Basel, Basel, Switzerland; Infectious Diseases & Hospital Epidemiology, University Hospital Basel, Basel, Switzerland; Transplantation & Clinical Virology, Department Biomedicine, University of Basel, Basel, Switzerland.
7 Clinical Bacteriology and Mycology, Laboratory Medicine, University Hospital Basel and University of Basel, Basel, Switzerland; Applied Microbiology Research, Laboratory Medicine, Department Biomedicine, University of Basel, Basel, Switzerland. Electronic address: adrian.egli@usb.ch.
1 Clinical Bacteriology and Mycology, Laboratory Medicine, University Hospital Basel and University of Basel, Basel, Switzerland.
2 Clinical Virology, Laboratory Medicine, University Hospital Basel, Basel, Switzerland.
3 Clinical Bacteriology and Mycology, Laboratory Medicine, University Hospital Basel and University of Basel, Basel, Switzerland; Applied Microbiology Research, Laboratory Medicine, Department Biomedicine, University of Basel, Basel, Switzerland.
4 Applied Microbiology Research, Laboratory Medicine, Department Biomedicine, University of Basel, Basel, Switzerland.
5 Laboratory Medicine, University Hospital Basel, Basel, Switzerland.
6 Clinical Virology, Laboratory Medicine, University Hospital Basel, Basel, Switzerland; Infectious Diseases & Hospital Epidemiology, University Hospital Basel, Basel, Switzerland; Transplantation & Clinical Virology, Department Biomedicine, University of Basel, Basel, Switzerland.
7 Clinical Bacteriology and Mycology, Laboratory Medicine, University Hospital Basel and University of Basel, Basel, Switzerland; Applied Microbiology Research, Laboratory Medicine, Department Biomedicine, University of Basel, Basel, Switzerland. Electronic address: adrian.egli@usb.ch.
The clinical and epidemiologic management of the SARS-CoV-2 pandemic is critically dependent on molecular assays with short turn-around time. We validated the novel Xpert Xpress SARS-CoV-2 assay using a commercial nucleic acid testing (Roche Cobas 6800). We found an excellent concordance over a range of SARS-CoV-2 loads and across established human coronaviruses.
All authors report no conflicts of interest relevant to this article.
Figures
Fig. 1
Correlation of Ct-values between different…
Fig. 1
Correlation of Ct-values between different assays and targeted viral genes for the n…
Fig. 1
Correlation of Ct-values between different assays and targeted viral genes for the n = 10 positive samples. Formula for best fit linear curve is shown (Graph Pad Prism version 8.4.0). Linear regression analysis was used to calculate R (O’Connell et al., 2020).
Cepheid . U.S. Food and Drug Administration website; 2020. Xpert Xpress SARS-CoV-2 Test: package insert.https://www.fda.gov/media/136314/download [cited 2020 24.04.2020]. Available from:
Moran A., Beavis K.G., Matushek S.M., Ciaglia C., Francois N., Tesic V. The detection of SARS-CoV-2 using the Cepheid Xpert Xpress SARS-CoV-2 and Roche cobas SARS-CoV-2 assays. J. Clin. Microbiol. 2020 doi: 10.1128/JCM.00772-20.
-
DOI
-
PMC
-
PubMed
O’Connell S., Conlan C., Reidy M., Stack C., Mulgrew A., Baruah J. The impact of point-of-care testing for influenza A and B on patient flow and management in a medical assessment unit of a general hospital. BMC Res. Notes. 2020;13(1):143.
-
PMC
-
PubMed
Pan Y., Zhang D., Yang P., Poon L.L.M., Wang Q. Viral load of SARS-CoV-2 in clinical samples. Lancet Infect. Dis. 2020;20(4):411–412.
-
PMC
-
PubMed
Tang Y.W., Schmitz J.E., Persing D.H., Stratton C.W. The laboratory diagnosis of COVID-19 infection: current issues and challenges. J. Clin. Microbiol. 2020;58(6):1–9.
-
PMC
-
PubMed