COVID-19: from rapid genome sequencing to fast decisions

doi:10.1016/S1473-3099(20)30580-6

Comment

. 2020 Nov;20(11):1218.

doi: 10.1016/S1473-3099(20)30580-6. Epub 2020 Jul 14.

COVID-19: from rapid genome sequencing to fast decisions

Ole Behrmann¹, Martin Spiegel²

Affiliations

¹ Brandenburg Medical School Theodor Fontane, 16816 Neuruppin, Germany. Electronic address: ole.behrmann@mhb-fontane.de.
² Brandenburg Medical School Theodor Fontane, 16816 Neuruppin, Germany.

PMID: 32679087
PMCID: PMC7832804
DOI: 10.1016/S1473-3099(20)30580-6

Comment

COVID-19: from rapid genome sequencing to fast decisions

Ole Behrmann et al. Lancet Infect Dis. 2020 Nov.

. 2020 Nov;20(11):1218.

doi: 10.1016/S1473-3099(20)30580-6. Epub 2020 Jul 14.

Authors

Ole Behrmann¹, Martin Spiegel²

Affiliations

¹ Brandenburg Medical School Theodor Fontane, 16816 Neuruppin, Germany. Electronic address: ole.behrmann@mhb-fontane.de.
² Brandenburg Medical School Theodor Fontane, 16816 Neuruppin, Germany.

PMID: 32679087
PMCID: PMC7832804
DOI: 10.1016/S1473-3099(20)30580-6

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Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective genomic surveillance study.
Meredith LW, Hamilton WL, Warne B, Houldcroft CJ, Hosmillo M, Jahun AS, Curran MD, Parmar S, Caller LG, Caddy SL, Khokhar FA, Yakovleva A, Hall G, Feltwell T, Forrest S, Sridhar S, Weekes MP, Baker S, Brown N, Moore E, Popay A, Roddick I, Reacher M, Gouliouris T, Peacock SJ, Dougan G, Török ME, Goodfellow I. Meredith LW, et al. Lancet Infect Dis. 2020 Nov;20(11):1263-1272. doi: 10.1016/S1473-3099(20)30562-4. Epub 2020 Jul 14. Lancet Infect Dis. 2020. PMID: 32679081 Free PMC article.

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References

1. D'Cruz RJ, Currier AW, Sampson VB. Laboratory testing methods for novel severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) Front Cell Dev Biol. 2020;8:468. - PMC - PubMed
1. Shi J, Han D, Zhang R, Li J, Zhang R. Molecular and serological assays for SARS-CoV-2: insights from genome and clinical characteristics. Clin Chem. 2020 https://doi:10.1093/clinchem/hvaa122 published online May 21. - DOI - PMC - PubMed
1. Bi Q, Wu Y, Mei S, et al. Epidemiology and transmission of COVID-19 in 391 cases and 1286 of their close contacts in Shenzhen, China: a retrospective cohort study. Lancet Infect Dis. 2020 doi: 10.1016/S1473-3099(20)30287-5. published online April 27. - DOI - PMC - PubMed
1. Meredith LW, Hamilton WL, Warne B, et al. Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective surveillance study. Lancet Infect Dis. 2020 doi: 10.1016/S1473-3099(20)30562-4. published online July 14. - DOI - PMC - PubMed
1. Quick J. nCoV-2019 sequencing protocol v2 v1. https://www.protocols.io/view/ncov-2019-sequencing-protocol-v2-bdp7i5rn

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[1] D'Cruz RJ, Currier AW, Sampson VB. Laboratory testing methods for novel severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) Front Cell Dev Biol. 2020;8:468. - PMC - PubMed

[2] D'Cruz RJ, Currier AW, Sampson VB. Laboratory testing methods for novel severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) Front Cell Dev Biol. 2020;8:468. - PMC - PubMed

[3] Shi J, Han D, Zhang R, Li J, Zhang R. Molecular and serological assays for SARS-CoV-2: insights from genome and clinical characteristics. Clin Chem. 2020 https://doi:10.1093/clinchem/hvaa122 published online May 21. - DOI - PMC - PubMed

[4] Shi J, Han D, Zhang R, Li J, Zhang R. Molecular and serological assays for SARS-CoV-2: insights from genome and clinical characteristics. Clin Chem. 2020 https://doi:10.1093/clinchem/hvaa122 published online May 21. - DOI - PMC - PubMed

[5] Bi Q, Wu Y, Mei S, et al. Epidemiology and transmission of COVID-19 in 391 cases and 1286 of their close contacts in Shenzhen, China: a retrospective cohort study. Lancet Infect Dis. 2020 doi: 10.1016/S1473-3099(20)30287-5. published online April 27. - DOI - PMC - PubMed

[6] Bi Q, Wu Y, Mei S, et al. Epidemiology and transmission of COVID-19 in 391 cases and 1286 of their close contacts in Shenzhen, China: a retrospective cohort study. Lancet Infect Dis. 2020 doi: 10.1016/S1473-3099(20)30287-5. published online April 27. - DOI - PMC - PubMed

[7] Meredith LW, Hamilton WL, Warne B, et al. Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective surveillance study. Lancet Infect Dis. 2020 doi: 10.1016/S1473-3099(20)30562-4. published online July 14. - DOI - PMC - PubMed

[8] Meredith LW, Hamilton WL, Warne B, et al. Rapid implementation of SARS-CoV-2 sequencing to investigate cases of health-care associated COVID-19: a prospective surveillance study. Lancet Infect Dis. 2020 doi: 10.1016/S1473-3099(20)30562-4. published online July 14. - DOI - PMC - PubMed

[9] Quick J. nCoV-2019 sequencing protocol v2 v1. https://www.protocols.io/view/ncov-2019-sequencing-protocol-v2-bdp7i5rn

[10] Quick J. nCoV-2019 sequencing protocol v2 v1. https://www.protocols.io/view/ncov-2019-sequencing-protocol-v2-bdp7i5rn

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COVID-19: from rapid genome sequencing to fast decisions

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COVID-19: from rapid genome sequencing to fast decisions

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