Author Correction: A robust benchmark for detection of germline large deletions and insertions

Justin M Zook¹, Nancy F Hansen², Nathan D Olson³, Lesley Chapman³, James C Mullikin², Chunlin Xiao⁴, Stephen Sherry⁴, Sergey Koren², Adam M Phillippy², Paul C Boutros⁵, Sayed Mohammad E Sahraeian⁶, Vincent Huang⁷, Alexandre Rouette⁸, Noah Alexander⁹, Christopher E Mason^{10

11

12

13}, Iman Hajirasouliha¹⁰, Camir Ricketts¹⁰, Joyce Lee¹⁴, Rick Tearle¹⁵, Ian T Fiddes¹⁶, Alvaro Martinez Barrio¹⁶, Jeremiah Wala¹⁷, Andrew Carroll¹⁸, Noushin Ghaffari¹⁹, Oscar L Rodriguez²⁰, Ali Bashir²⁰, Shaun Jackman²¹, John J Farrell²², Aaron M Wenger²³, Can Alkan²⁴, Arda Soylev²⁵, Michael C Schatz²⁶, Shilpa Garg²⁷, George Church²⁷, Tobias Marschall²⁸, Ken Chen²⁹, Xian Fan³⁰, Adam C English³¹, Jeffrey A Rosenfeld^{32

33}, Weichen Zhou³⁴, Ryan E Mills³⁴, Jay M Sage³⁵, Jennifer R Davis³⁵, Michael D Kaiser³⁵, John S Oliver³⁵, Anthony P Catalano³⁵, Mark J P Chaisson³⁶, Noah Spies³⁷, Fritz J Sedlazeck³⁸, Marc Salit³⁷

Affiliations

¹ Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, MD, USA. jzook@nist.gov.
² National Human Genome Research Institute, National Institutes of Health, Rockville, MD, USA.
³ Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, MD, USA.
⁴ National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
⁵ Department of Human Genetics, University of California, Los Angeles, Los Angeles, CA, USA.
⁶ Roche Sequencing Solutions, Belmont, CA, USA.
⁷ Ontario Institute for Cancer Research, Toronto, Ontario, Canada.
⁸ Charles-Bruneau Cancer Centre, Division of Hematology-Oncology, CHU Sainte-Justine, Montreal, Quebec, Canada.
⁹ Molecular Biology Institute, University of California, Los Angeles, Los Angeles CA, USA.
¹⁰ Department of Physiology and Biophysics, Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA.
¹¹ The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA.
¹² The WorldQuant Initiative for Quantitative Prediction, Weill Cornell Medicine, New York, NY, USA.
¹³ The Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, USA.
¹⁴ Bionano Genomics, Inc., San Diego, CA, USA.
¹⁵ Davies Research Centre, School of Animal and Veterinary Sciences, University of Adelaide, Roseworthy, SA, Australia.
¹⁶ 10× Genomics, Pleasanton, CA, USA.
¹⁷ Broad Institute of Harvard and MIT, Cambridge, MA, USA.
¹⁸ Google, Mountain View, CA, USA.
¹⁹ Department of Computer Science, Roy G. Perry College of Engineering, Prairie View A&M University, Prairie View, TX, USA.
²⁰ Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
²¹ BC Cancer Genome Sciences Centre, Vancouver, British Columbia, Canada.
²² Biomedical Genetics, Department of Medicine, Boston University Medical School, Boston, MA, USA.
²³ Pacific Biosciences, Menlo Park, CA, USA.
²⁴ Department of Computer Engineering, Bilkent University, Ankara, Turkey.
²⁵ Department of Computer Engineering, Konya Food and Agriculture University, Konya, Turkey.
²⁶ Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD, USA.
²⁷ Department of Genetics, Harvard Medical School, Boston, MA, USA.
²⁸ Heinrich Heine University, Medical Faculty, Düsseldorf, Germany.
²⁹ Department of Bioinformatics and Computational Biology, MD Anderson Cancer Center, Houston, TX, USA.
³⁰ Department of Computer Science, Rice University, Houston, TX, USA.
³¹ Bioinformatics R&D, Spiral Genetics, Seattle, WA, USA.
³² Rutgers Cancer Institute of New Jersey, New Brunswick, NJ, USA.
³³ Department of Pathology, Robert Wood Johnson Medical School, New Brunswick, NJ, USA.
³⁴ Department of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, MI, USA.
³⁵ Nabsys 2.0, LLC, Providence, RI, USA.
³⁶ Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA.
³⁷ Joint Initiative for Metrology in Biology, SLAC National Accelerator Lab, Stanford University, Stanford, CA, USA.
³⁸ Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.

PMID: 32699374
DOI: 10.1038/s41587-020-0640-y

Published Erratum

Author Correction: A robust benchmark for detection of germline large deletions and insertions

Justin M Zook et al. Nat Biotechnol. 2020 Nov.

. 2020 Nov;38(11):1357.

doi: 10.1038/s41587-020-0640-y.

Authors

Affiliations

¹ Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, MD, USA. jzook@nist.gov.
² National Human Genome Research Institute, National Institutes of Health, Rockville, MD, USA.
³ Material Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, MD, USA.
⁴ National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA.
⁵ Department of Human Genetics, University of California, Los Angeles, Los Angeles, CA, USA.
⁶ Roche Sequencing Solutions, Belmont, CA, USA.
⁷ Ontario Institute for Cancer Research, Toronto, Ontario, Canada.
⁸ Charles-Bruneau Cancer Centre, Division of Hematology-Oncology, CHU Sainte-Justine, Montreal, Quebec, Canada.
⁹ Molecular Biology Institute, University of California, Los Angeles, Los Angeles CA, USA.
¹⁰ Department of Physiology and Biophysics, Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA.
¹¹ The HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medicine, New York, NY, USA.
¹² The WorldQuant Initiative for Quantitative Prediction, Weill Cornell Medicine, New York, NY, USA.
¹³ The Feil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, NY, USA.
¹⁴ Bionano Genomics, Inc., San Diego, CA, USA.
¹⁵ Davies Research Centre, School of Animal and Veterinary Sciences, University of Adelaide, Roseworthy, SA, Australia.
¹⁶ 10× Genomics, Pleasanton, CA, USA.
¹⁷ Broad Institute of Harvard and MIT, Cambridge, MA, USA.
¹⁸ Google, Mountain View, CA, USA.
¹⁹ Department of Computer Science, Roy G. Perry College of Engineering, Prairie View A&M University, Prairie View, TX, USA.
²⁰ Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
²¹ BC Cancer Genome Sciences Centre, Vancouver, British Columbia, Canada.
²² Biomedical Genetics, Department of Medicine, Boston University Medical School, Boston, MA, USA.
²³ Pacific Biosciences, Menlo Park, CA, USA.
²⁴ Department of Computer Engineering, Bilkent University, Ankara, Turkey.
²⁵ Department of Computer Engineering, Konya Food and Agriculture University, Konya, Turkey.
²⁶ Departments of Computer Science and Biology, Johns Hopkins University, Baltimore, MD, USA.
²⁷ Department of Genetics, Harvard Medical School, Boston, MA, USA.
²⁸ Heinrich Heine University, Medical Faculty, Düsseldorf, Germany.
²⁹ Department of Bioinformatics and Computational Biology, MD Anderson Cancer Center, Houston, TX, USA.
³⁰ Department of Computer Science, Rice University, Houston, TX, USA.
³¹ Bioinformatics R&D, Spiral Genetics, Seattle, WA, USA.
³² Rutgers Cancer Institute of New Jersey, New Brunswick, NJ, USA.
³³ Department of Pathology, Robert Wood Johnson Medical School, New Brunswick, NJ, USA.
³⁴ Department of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, MI, USA.
³⁵ Nabsys 2.0, LLC, Providence, RI, USA.
³⁶ Quantitative and Computational Biology, University of Southern California, Los Angeles, CA, USA.
³⁷ Joint Initiative for Metrology in Biology, SLAC National Accelerator Lab, Stanford University, Stanford, CA, USA.
³⁸ Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA.

PMID: 32699374
DOI: 10.1038/s41587-020-0640-y

Abstract

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

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Erratum for

A robust benchmark for detection of germline large deletions and insertions.
Zook JM, Hansen NF, Olson ND, Chapman L, Mullikin JC, Xiao C, Sherry S, Koren S, Phillippy AM, Boutros PC, Sahraeian SME, Huang V, Rouette A, Alexander N, Mason CE, Hajirasouliha I, Ricketts C, Lee J, Tearle R, Fiddes IT, Barrio AM, Wala J, Carroll A, Ghaffari N, Rodriguez OL, Bashir A, Jackman S, Farrell JJ, Wenger AM, Alkan C, Soylev A, Schatz MC, Garg S, Church G, Marschall T, Chen K, Fan X, English AC, Rosenfeld JA, Zhou W, Mills RE, Sage JM, Davis JR, Kaiser MD, Oliver JS, Catalano AP, Chaisson MJP, Spies N, Sedlazeck FJ, Salit M. Zook JM, et al. Nat Biotechnol. 2020 Nov;38(11):1347-1355. doi: 10.1038/s41587-020-0538-8. Epub 2020 Jun 15. Nat Biotechnol. 2020. PMID: 32541955 Free PMC article.

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Author Correction: A robust benchmark for detection of germline large deletions and insertions

Affiliations

Author Correction: A robust benchmark for detection of germline large deletions and insertions

Authors

Affiliations

Abstract

Erratum for

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LinkOut - more resources

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