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. 2021 Oct 5;73(7):e2217-e2225.
doi: 10.1093/cid/ciaa1068.

Drug Resistance Mutations Among South African Children Living With HIV on WHO-recommended ART Regimens

Affiliations

Drug Resistance Mutations Among South African Children Living With HIV on WHO-recommended ART Regimens

Stephanie Hackett et al. Clin Infect Dis. .

Abstract

Background: Children living with human immunodeficiency virus (HIV) (CLHIV) receiving antiretroviral therapy (ART) in resource-limited settings are susceptible to high rates of acquired HIV drug resistance (HIVDR), but few studies include children initiating age-appropriate World Health Organization (WHO)-recommended first-line regimens. We report data from a cohort of ART-naive South African children who initiated first-line ART.

Methods: ART-eligible CLHIV aged 0-12 years were enrolled from 2012 to 2014 at 5 public South African facilities and were followed for up to 24 months. Enrolled CLHIV received standard-of-care WHO-recommended first-line ART. At the final study visit, a dried blood spot sample was obtained for viral load and genotypic resistance testing.

Results: Among 72 successfully genotyped CLHIV, 49 (68.1%) received ABC/3TC/LPV/r, and 23 (31.9%) received ABC/3TC/EFV. All but 2 children on ABC/3TC/LPV/r were <3 years, and all CLHIV on ABC/3TC/EFV were ≥3 years. Overall, 80.6% (58/72) had at least one drug resistance mutation (DRM). DRMs to nonnucleoside reverse transcriptase inhibitors (NNRTIs) and nucleoside reverse transcriptase inhibitors (NRTIs) were found among 65% and 51% of all CLHIV, respectively, with no statistical difference by ART regimen. More CLHIV on ABC/3TC/EFV, 47.8% (11/23), were found to have 0 or only 1 effective antiretroviral drug remaining in their current regimen compared to 8.2% (4/49) on ABC/3TC/LPV/r.

Conclusions: High levels of NNRTI and NRTI DRMs among CLHIV receiving ABC/3TC/LPV/r suggests a lasting impact of failed mother-to-child transmission interventions on DRMs. However, drug susceptibility analysis reveals that CLHIV with detectable viremia on ABC/3TC/LPV/r are more likely to have maintained at least 2 effective agents on their current HIV regimen than those on ABC/3TC/EFV.

Keywords: HIV drug resistance; children; pediatric HIV; resource-limited settings.

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Conflict of interest statement

Potential conflicts of interest. J. D. reports patent US10053741B2 with royalties paid to Life Technologies. All other authors report no potential conflicts. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed.

Figures

Figure 1.
Figure 1.
Heat map of HIV drug resistance and drug susceptibility among South African children 0–12 years with detectable viremia (viral load >832 copies/mL) and successful amplification of dried blood spot samples by ART regimen (n = 72). Abbreviations: 3TC, lamivudine; ABC, abacavir; ART, antiretroviral therapy; AZT, zidovudine; EFV, efavirenz; HIV, human immunodeficiency virus; LPV/r, lopinavir/ritonavir.
Figure 2.
Figure 2.
Major drug resistance mutations by ART regimen type among South African children on LPV/r- and EFV-based therapy in South Africa from 2012–2015. Abbreviations: 3TC, lamivudine; ABC, abacavir; ART, antiretroviral therapy; AZT, zidovudine; EFV, efavirenz; LPV/r, lopinavir/ritonavir; NNRTIs, nonnucleoside reverse transcriptase inhibitors; NRTIs, nucleoside reverse transcriptase inhibitors..
Figure 3.
Figure 3.
Effectiveness of current ART regimen among South African children 0–12 years living with HIV with detectable viremia (viral load >832 copies/mL) and successful amplification of dried blood spot samples (n = 72). Abbreviations: 3TC, lamivudine; ABC, abacavir; ART, antiretroviral therapy; ARVs, antiretrovirals; EFV, efavirenz; HIV, human immunodeficiency virus; LPV/r, lopinavir/ritonavir.

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