Microscopic brain tumor detection and classification using 3D CNN and feature selection architecture
- PMID: 32959422
- DOI: 10.1002/jemt.23597
Microscopic brain tumor detection and classification using 3D CNN and feature selection architecture
Abstract
Brain tumor is one of the most dreadful natures of cancer and caused a huge number of deaths among kids and adults from the past few years. According to WHO standard, the 700,000 humans are being with a brain tumor and around 86,000 are diagnosed since 2019. While the total number of deaths due to brain tumors is 16,830 since 2019 and the average survival rate is 35%. Therefore, automated techniques are needed to grade brain tumors precisely from MRI scans. In this work, a new deep learning-based method is proposed for microscopic brain tumor detection and tumor type classification. A 3D convolutional neural network (CNN) architecture is designed at the first step to extract brain tumor and extracted tumors are passed to a pretrained CNN model for feature extraction. The extracted features are transferred to the correlation-based selection method and as the output, the best features are selected. These selected features are validated through feed-forward neural network for final classification. Three BraTS datasets 2015, 2017, and 2018 are utilized for experiments, validation, and accomplished an accuracy of 98.32, 96.97, and 92.67%, respectively. A comparison with existing techniques shows the proposed design yields comparable accuracy.
Keywords: 3D CNN; World Health Organization (WHO); cancer; healthcare; public health.
© 2020 Wiley Periodicals LLC.
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References
REFERENCES
-
- Abbas, N., Saba, T., Rehman, A., Mehmood, Z., Kolivand, H., Uddin, M., & Anjum, A. (2018). Plasmodium life cycle stage classification based quantification of malaria parasitaemia in thin blood smears. Microscopy Research and Technique, 82(3), 283-295. https://doi.org/10.1002/jemt.23170
-
- Abbas, N., Saba, T., Mohamad, D., Rehman, A., Almazyad, A. S., & Al-Ghamdi, J. S. (2018). Machine aided malaria parasitemia detection in Giemsa-stained thin blood smears. Neural Computing and Applications, 29(3), 803-818. https://doi.org/10.1007/s00521-016-2474-6
-
- Abbas, A., Saba, T., Rehman, A., Mehmood, Z., Javaid, N., Tahir, M., … Shah, R. (2019). Plasmodium species aware based quantification of malaria, parasitemia in light microscopy thin blood smear. Microscopy Research and Technique, 82(7), 1198-1214. https://doi.org/10.1002/jemt.23269
-
- Abbas, N., Saba, T., Mehmood, Z., Rehman, A., Islam, N., & Ahmed, K. T. (2019). An automated nuclei segmentation of leukocytes from microscopic digital images. Pakistan Journal of Pharmaceutical Sciences, 32(5), 2123-2138.
-
- Al-Ameen, Z., Sulong, G., Rehman, A., Al-Dhelaan, A., Saba, T., & Al-Rodhaan, M. (2015). An innovative technique for contrast enhancement of computed tomography images using normalized gamma-corrected contrast-limited adaptive histogram equalization. EURASIP Journal on Advances in Signal Processing, 2015, 32. https://doi.org/10.1186/s13634-015-0214-1
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