Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2020 Dec;30(9):201-207.
doi: 10.1097/FPC.0000000000000414.

Methods and implementation of a pediatric asthma pharmacogenomic study in the emergency department setting

Affiliations

Methods and implementation of a pediatric asthma pharmacogenomic study in the emergency department setting

Jennifer N Fishe et al. Pharmacogenet Genomics. 2020 Dec.

Abstract

Objectives: The emergency department (ED) is a challenging setting to conduct pharmacogenomic studies and integrate that data into fast-paced and potentially life-saving treatment decisions. Therefore, our objective is to present the methods and feasibility of a pilot pharmacogenomic study set in the ED that measured pediatric bronchodilator response (BDR) during acute asthma exacerbations.

Methods: This is an exploratory pilot study that collected buccal swabs for DNA and measured BDR during ED encounters for pediatric asthma exacerbations. We evaluated the study's feasibility with a qualitative analysis of ED provider surveys and quantitatively by the proportion of eligible patients enrolled.

Results: We enrolled 59 out of 90 patients (65%) that were identified and considered eligible during a 5-month period (target enrollment 60 patients over 12 months). The median patient age was 7 years (interquartile range 4-9 years), 61% (N = 36) were male, and 92% (N = 54) were African American. Quality DNA collection was successful for all 59 patients. The ED provider survey response rate was 100%. Most ED providers reported that the study did not impact their workflow (98% of physicians, 88% of nurses, and 90% of respiratory therapists). ED providers did report difficulties with spirometry in the younger age group.

Conclusions: Pharmacogenomic studies can be conducted in the ED setting, and enroll a younger patient population with a high proportion of minority participants. By disseminating this study's methods and feasibility analysis, we aim to increase interest in pharmacogenomic studies set in the ED and aimed toward future ED-based pharmacogenomic decision-making.

PubMed Disclaimer

Conflict of interest statement

Conflicts of Interest: None declared.

Figures

Figure 1:
Figure 1:
Frontline Emergency Department Provider Survey Responses regarding Study Impact on Workflow
Figure 2:
Figure 2:
Word Cloud of Free Text Comments in Front-line Staff Surveys Delayed treatment (N=5), Distracted Patient/Parent (N=2), Machine did not work (N=2), Patient unable to complete (N=2), Patient was in distress (N=2), Too young (N=2), Not Cooperating (N=1), Not Needed (N=1), Parent Refused (N=1), Easy (N=1)

Similar articles

Cited by

References

    1. Ashley EA. “Towards precision medicine.” Nat Rev Genet. 2016;17:507–22. - PubMed
    1. Farrugia G, Weinshilboum RM. “Challenges in implementing genomic medicine: the Mayo Clinic Center for Individualized Medicine.” Clin Pharmacol Ther. 2013;94(2):204–6. - PMC - PubMed
    1. U.S. Food and Drug Administration, Table of Pharmacogenetic Associations. Available at: https://www.fda.gov/medical-devices/precision-medicine/table-pharmacogen.... Accessed May 14, 2020.
    1. Cavallari LH, Van Driest SL, Prows CA, et al., IGNITE Network. “Multi-site investigation of strategies for the clinical implementation of CYPD2D6 genotyping to guide drug prescribing.” Genet Med. 2019;21(10):2255–63. - PMC - PubMed
    1. Bourgeouis FT, Avillach P, Kong SW, et al. “Development of the Precision Link Biobank at Boston Children’s Hospital: Challenges and Opportunities.” J Pers Med. 2017;7(4):21. - PMC - PubMed

Publication types