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. 2020 Oct 29;9(44):e01025-20.
doi: 10.1128/MRA.01025-20.

An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data

Mohammed-Husain Bharmal #  1 , James R Aretakis #  1 , Jared M Schrader  2
Affiliations

An Improved Caulobacter crescentus Operon Annotation Based on Transcriptome Data

Mohammed-Husain Bharmal et al. Microbiol Resour Announc. .

Abstract

Caulobacter crescentus is a model alphaproteobacterium with a well-studied genetic network controlling its cell cycle. Essential for such studies is an accurate map of the expressed features of its genome. Here, we provide an updated map of the expressed RNAs by integrative analysis of 5' global rapid amplification of cDNA ends, transcriptome sequencing, rifampicin treatment RNA sequencing, and RNA end-enriched sequencing data sets.

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Figures

FIG 1
FIG 1
Examples of simple and complex operons. (A) A simple operon containing one predicted TU. (B) A complex operon containing more than one TSS driving multiple TUs. (C) A complex operon with a single predicted TU harboring a stable ncRNA.
See this image and copyright information in PMC

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