Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2020 Nov 21:33:106555.
doi: 10.1016/j.dib.2020.106555. eCollection 2020 Dec.

Data sets on human histone interaction networks

Affiliations

Data sets on human histone interaction networks

Yunhui Peng et al. Data Brief. .

Abstract

Here, we present the data of human histone interactomes generated and analysed in the research article by Peng et al., 2020 [1]. The histone interactome data provide a comprehensive mapping of human histone/nucleosome interaction networks by using different data sources from the structural, chemical cross-linking, and high-throughput studies. The histone interactions are presented at different levels of granularity in networks, including protein, domain, and residue-levels. All human histone interactome Cytoscape session files are available at https://github.com/Panchenko-Lab/Human-histone-interactome.

Keywords: Histone interaction; Histone variant; Interaction network; Interactome; Nucleosome interaction.

PubMed Disclaimer

Conflict of interest statement

The authors declare that they have no known competing financial interests or personal relationships which have or could be perceived to have influenced the work reported in this article.

References

    1. Peng Y., Markov Y., Goncearenco A., Landsman D., Panchenko A.R. Human histone interaction networks: an old concept, new trends. J. Mol. Biol. 2020 Oct 21 doi: 10.1016/j.jmb.2020.10.018. S0022-2836(20)30594-5. - DOI - PMC - PubMed
    1. Berman H.M., Westbrook J., Feng Z., Gilliland G., Bhat T.N., Weissig H. The protein data bank. Nucleic. Acids. Res. 2000;28:235–242. - PMC - PubMed
    1. Fasci D., van Ingen H., Scheltema R.A., Heck A.J.R. Histone interaction landscapes visualized by crosslinking mass spectrometry in intact cell nuclei. Mol. Cell. Proteomics. 2018;17:2018–2033. - PMC - PubMed
    1. Alonso-Lopez D., Campos-Laborie F.J., Gutierrez M.A., Lambourne L., Calderwood M.A., Vidal M. APID database: redefining protein-protein interaction experimental evidences and binary interactomes. Database (Oxford) 2019;2019 - PMC - PubMed
    1. Smoot M.E., Ono K., Ruscheinski J., Wang P.L., Ideker T. Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics. 2011;27:431–432. - PMC - PubMed

LinkOut - more resources