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Review
. 2021 Jun 16;223(12 Suppl 2):S264-S269.
doi: 10.1093/infdis/jiaa682.

Sepsis and the Microbiome: A Vicious Cycle

Affiliations
Review

Sepsis and the Microbiome: A Vicious Cycle

William D Miller et al. J Infect Dis. .

Abstract

Sepsis has been characterized as a dysregulated host response to infection, and the role of the microbiome as a key influencer of this response is emerging. Disruption of the microbiome while treating sepsis with antibiotics can itself result in immune dysregulation. Alterations in the gut microbiome resulting from sepsis and its treatment have been implicated in organ dysfunction typical of sepsis across multiple tissues including the lung, kidney, and brain. Multiple microbiota-directed interventions are currently under investigation in the setting of sepsis, including fecal transplant, the administration of dietary fiber, and the use of antibiotic scavengers that attenuate the effects of antibiotics on the gut microbiota while allowing them to concentrate at the primary sites of infection. The emerging evidence shows that the gut microbiome interacts with various elements of the septic response, and provides yet another reason to consider the judicious use of antibiotics via antibiotic stewardship programs.

Keywords: antibiotics; immune system; microbiome; sepsis.

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Figures

Figure 1.
Figure 1.
Microbiome and sepsis.

References

    1. Rhee C, Dantes R, Epstein L, et al. . Incidence and trends of sepsis in US hospitals using clinical vs claims data, 2009–2014. JAMA 2017; 318:1241. - PMC - PubMed
    1. Singer M, Deutschman CS, Seymour CW, et al. . The Third International Consensus definitions for sepsis and septic shock (Sepsis-3). JAMA 2016; 315:801–10. - PMC - PubMed
    1. Ubeda C, Taur Y, Jenq RR, et al. . Vancomycin-resistant Enterococcus domination of intestinal microbiota is enabled by antibiotic treatment in mice and precedes bloodstream invasion in humans. J Clin Invest 2010; 120:4332–41. - PMC - PubMed
    1. Taur Y, Xavier JB, Lipuma L, et al. . Intestinal domination and the risk of bacteremia in patients undergoing allogeneic hematopoietic stem cell transplantation. Clin Infect Dis 2012; 55:905–14. - PMC - PubMed
    1. Baggs J, Jernigan JA, Halpin AL, Epstein L, Hatfield KM, McDonald LC. Risk of subsequent sepsis within 90 days after a hospital stay by type of antibiotic exposure. Clin Infect Dis 2018; 66:1004–12. - PMC - PubMed

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