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. 2019 Jul 11;4(2):2131-2132.
doi: 10.1080/23802359.2019.1623117.

Complete chloroplast genome sequences of Poikilospermum lanceolatum (Urticeae)

Xianhan Huang  1   2   3 , Tao Deng  2 , Nan Lin  2   3   4 , Zhenyu Lv  5 , Xu Zhang  2   3   4 , Zhuo Zhou  2 , Yuehua Wang  1 , Hang Sun  2
Affiliations

Complete chloroplast genome sequences of Poikilospermum lanceolatum (Urticeae)

Xianhan Huang et al. Mitochondrial DNA B Resour. .

Abstract

The complete chloroplast genome of Poikilospermum lanceolatum was sequenced using HiSeq4000 of Illumina. The length of this genome was 153, 454 bp, including a large single copy (LSC) region (84,202 bp), a small single copy (SSC) region (18,172 bp), and two inverted repeat (IR) regions (25,540 bp). The overall GC content of the genome of P. lanceolatum was 36.9%. The genome included 111 unique genes (78 protein-coding genes, 29 tRNA genes, and four rRNA genes). Phylogenetic analysis based on 67 protein-coding genes showed that Boehmerieae was sister to P. lanceolatum, with 100% bootstrap values.

Keywords: Chloroplast genome; Poikilospermum lanceolatum; phylogenetic analysis.

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Conflict of interest statement

No potential conflict of interest was reported by the authors.

Figures

Figure 1.
Figure 1.
Phylogeny of Poikilospermum lanceolatum and other 11 species of Rosales based on the 67 common protein-coding gene sequences using maximum-likelihood method. The numbers at the nodes indicate bootstrap support values.
See this image and copyright information in PMC

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