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. 2019 Nov 14;4(2):4061-4062.
doi: 10.1080/23802359.2019.1688100.

The complete mitochondrial genome of Acrossocheilus yunnanensis (Teleostei: Cypriniformes: Cyprinidae) and its phylogenetic position

Chuntao Li  1 , Kaiqin Chen  1 , Zhengmin Qian  1 , Boping Zeng  1 , Peiyong Song  1 , Zili Jiang  1
Affiliations

The complete mitochondrial genome of Acrossocheilus yunnanensis (Teleostei: Cypriniformes: Cyprinidae) and its phylogenetic position

Chuntao Li et al. Mitochondrial DNA B Resour. .

Abstract

The complete mitochondrial genome of Acrossocheilus yunnanensis was determined in this study. It contained 13 protein-coding genes (PCGs), 22 tRNA, 2 rRNAs, and a control region with the base composition 31.47% A, 27.83% C, 24.65% T, and 16.05% G. Here we compared this newly determined mitogenome with another one from the same species reported before. The variable sites and the genetic distances between the two mitogenomes were 134 bp and 0.8%. Sixty-five variable sites occurred in the PCGs. The results from the phylogenetic analysis showed that the genus Acrossocheilus is not a monophyletic group and Acrossocheilus yunnanensis demonstrates a close relationship with Acrossocheilus monticola.

Keywords: Acrossocheilus yunnanensis; Cyprinidae; Mitochondrial DNA; phylogeny.

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Conflict of interest statement

No potential conflict of interest was reported by the authors.

Figures

Figure 1.
Figure 1.
Phylogenetic tree of Acrossocheilus yunnanensis and the other 21 cyprinid species based on maximum-likelihood (ML) method. The ML bootstrap values are shown at the nodes.
See this image and copyright information in PMC

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References

    1. Froese R, Pauly D, editors. 2019. FishBase. World Wide Web electronic publication; [accessed 2019 September 2]. http://www.fishbase.org, version (08/2019).
    1. Hoang DT, Chernomor O, von Haeseler A, Minh BQ, Vinh LS. 2018. UFBoot2: improving the ultrafast bootstrap approximation. Mol Biol Evol. 35(2):518–522. - PMC - PubMed
    1. Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ. 2015. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol Biol Evol. 32(1):268–274. - PMC - PubMed
    1. Posada D, Crandall KA. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics. 14(9):817–818. - PubMed
    1. Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP, et al. . 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61(3):539–542. - PMC - PubMed

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