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. 2019 Nov 21;4(2):4138-4139.
doi: 10.1080/23802359.2019.1692734.

The complete chloroplast genome of Eria corneri (Orchidaceae)

Shan-Hu Ma  1 , Juan Chen  1 , Jie Zhou  1 , Qing-Dong Zheng  1 , Ming-Kun Chen  1 , Tai-Xiang Xie  1 , Ye Ai  1
Affiliations

The complete chloroplast genome of Eria corneri (Orchidaceae)

Shan-Hu Ma et al. Mitochondrial DNA B Resour. .

Abstract

Eria corneri is a perennial epiphytic orchid distributed in southeastern China with high value of ornamental and medicinal. In this study, the complete chloroplast genome sequence of E. corneri was determined from Illumina pair-end sequencing data. The complete chloroplast genome sequence of E. corneri is 150,538 base pairs (bp) in length, including one large single-copy region (LSC, 85,941 bp), one small single-copy region (SSC, 13,099 bp), and a pair of inverted repeat regions (IRs) of 25,749 bp. Besides, the complete chloroplast genome contains 132 genes, including 77 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that E. corneri was most closely related to Calanthe triplicata and Calanthe davidii. Our study provides a foundation for the identification and genotyping of Eria species.

Keywords: Chloroplast genome; Eria corneri; Orchidaceae; phylogenetic analysis.

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Conflict of interest statement

There are no conflicts of interest for all the authors including the implementation of research experiments and writing this article.

Figures

Figure 1.
Figure 1.
A phylogenetic tree was constructed based on 13 complete chloroplast genome sequences of Orchidaceae. All the sequences were downloaded from NCBI GenBank.
See this image and copyright information in PMC

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