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. 2020 Jan 7;5(1):362-363.
doi: 10.1080/23802359.2019.1703569.

Characterization and phylogenetic significance of the complete chloroplast genome of Camellia Kissii, an economic crop for producing oil

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Characterization and phylogenetic significance of the complete chloroplast genome of Camellia Kissii, an economic crop for producing oil

Lei Cao et al. Mitochondrial DNA B Resour. .

Abstract

Camellia kissii is cultivated for a long time as an oil crop for edible and industrial oils, and has the functions of high oil production rate and unique health care. The complete chloroplast (cp) genome sequence of C. kissii is 156,961 bp in length with GC content of 39.29%. It presents a quadrate structure, including a large single-copy (LSC) region (86,640 bp), a small single-copy (SSC) region (18,399 bp), and a pair of inverted repeats (IRs) (25,961 bp). Meanwhile, 15 complete chloroplast genome of Camellia was aligned to explore the phylogenetic significance of Camellia. And the genetic relationship between Camellia kissii and Camellia huana was found to be closest.

Keywords: Camellia kissii; chloroplast genome; oil production; phylogenetic significance.

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Conflict of interest statement

No potential conflict of interest was reported by the authors.

Figures

Figure 1.
Figure 1.
The Neighbor-joining (NJ) phylogenetic tree for Camellia kissii with other Camellia species based on conserved 75 protein sequences of cp genomes.

References

    1. Bi C, Paterson AH, Wang X, Xu Y, Wu D, Qu Y, Jiang A, Ye Q, Ye N. 2016. Analysis of the complete mitochondrial genome sequence of the diploid cotton Gossypium raimondii by comparative genomics approaches. BioMed Res Int. 2016:18. - PMC - PubMed
    1. Cao L, Guo C, Chen J. 2016. Fluctuation in seed abundance has contrasting effects on the fate of seeds from two rapidly geminating tree species in an Asian tropical forest. Integr Zool. 12(1):2–11. - PubMed
    1. Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution. 39(4):783–791. - PubMed
    1. Langmead B, Salzberg SL. 2012. Fast gapped-read alignment with Bowtie 2. Nat Methods. 9(4):357–359. - PMC - PubMed
    1. Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol. 4(4):406–425. - PubMed

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