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. 2020 Feb 3;5(1):982-983.
doi: 10.1080/23802359.2020.1719932.

The complete chloroplast genome sequence of Hippophae rhamnoides subsp. sinensis

Songfeng Diao  1   2 , Guoyun Zhang  1 , Caiyun He  1 , Aiguo Duan  1 , Jianguo Zhang  1   3
Affiliations

The complete chloroplast genome sequence of Hippophae rhamnoides subsp. sinensis

Songfeng Diao et al. Mitochondrial DNA B Resour. .

Abstract

The complete chloroplast genome sequence of Hippophae rahmnoides subsp. sinensis was characterized from Illumina pair-end sequencing. The chloroplast genome of H. rahmnoides subsp. sinensis was 156,355 bp in length, containing a large single-copy region (LSC) of 84,002 bp, a small single-copy region (SSC) of 19,055 bp, and two inverted repeat (IR) regions of 26,649 bp. The overall GC content is 36.6%, while the corresponding values of the LSC, SSC, and IR regions are 64.5%, 69.2%, and 60.1%, respectively. The genome contains 131 complete genes, including 88 protein-coding genes, 38 tRNA genes (29 tRNA species), and 8 rRNA genes (4 rRNA species). The neighbour-joining phylogenetic analysis showed that H. rahmnoides subsp. sinensis and H. rahmnoides clustered together as sisters to other H. rahmnoides species.

Keywords: Hippophae rahmnoides subsp. sinensis; chloroplast genome; genetic information; phylogenetic analysis.

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Conflict of interest statement

No potential conflict of interest was reported by the authors.

Figures

Figure 1.
Figure 1.
Neighbour-joining (NJ) analysis of H. rahmnoides subsp. sinensis and other related species based on the complete chloroplast genome sequence.
See this image and copyright information in PMC

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