The complete chloroplast genome of Aquilegia barnebyi, a basal eudicot species
- PMID: 33366874
- PMCID: PMC7748838
- DOI: 10.1080/23802359.2020.1719919
The complete chloroplast genome of Aquilegia barnebyi, a basal eudicot species
Abstract
Aquilegia barnebyi, belonging to the genus Aquilegia (Ranunculaceae), is a member of basal eudicot species. In this study, we obtained the complete chloroplast (cp) genome of A. barnebyi. The genome size is 161,954 bp with a GC content of 38.98%. A total of 113 unique genes including 79 protein-coding genes, 30 tRNA genes, four rRNA genes were annotated. The large single-copy region and small single-copy region contains 91,250 bp and 17,359 bp, respectively. The inverted repeat regions are 26,671 bp in length. The phyologenetic analysis indicated that A. barnebyi had a close relationship with A. coerulea. And four species in genus Aquilegia formed a monophyletic group with high support value. The availability of A. barnebyi cp genomic resources will greatly helpful for taxonomy, phylogeny and conservation genetic studies of basal eudicot specie.
Keywords: Aquilegia barnebyi; basal eudicot species; chloroplast genome; phyologenetic analyze.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.
Conflict of interest statement
No potential conflict of interest was reported by the authors.
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References
-
- Filiault DL, Ballerini ES, Mandáková TM, Aköz G, Derieg NJ, Schmutz J, Jenkins J, Grimwood J, Shu S, Hayes RD, Hellsten U, et al. . 2018. The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history. eLife. 7:e36426. - PMC - PubMed
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