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. 2020 Nov 13;5(3):3750-3751.
doi: 10.1080/23802359.2020.1835580.

The complete chloroplast genome of Vatica guangxiensis S.L. Mo (Dipterocarpaceae): genome structure and evolution

Li-Li Deng  1 , Hui-Zhen Qin  1 , Yan-Cai Shi  1
Affiliations

The complete chloroplast genome of Vatica guangxiensis S.L. Mo (Dipterocarpaceae): genome structure and evolution

Li-Li Deng et al. Mitochondrial DNA B Resour. .

Abstract

Vatica guangxiensis S.L. Mo is an evergreen large tree of Dipterocarpaceae. Herein, we assembled the complete chloroplast genome of Vatica guangxiensis by next-generation sequencing technologies. The complete chloroplast genome sequence of Vatica guangxiensis is 151,010 base pairs (bp) in length, including a pair of inverted repeat regions (IRs, 23,827 bp), one large single-copy region (LSC, 83,353 bp), one small single-copy region (SSC, 20,003 bp). Besides, the complete chloroplast genome contains 123 genes in total, including 83 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that Vatica guangxiensis has the closest relationship with Vatica mangachapoi. Our study lay a foundation for further research of Vatica mangachapoi.

Keywords: Chloroplast genome; Dipterocarpaceae; Vatica guangxiensis; phylogenetic analysis.

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Conflict of interest statement

No potential conflict of interest was reported by the author(s).

Figures

Figure 1.
Figure 1.
A Phylogenetic tree was constructed based on 21 complete chloroplast genome sequences. All the sequences were downloaded from NCBI GenBank.0.
See this image and copyright information in PMC

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