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. 2020 Jul 14;5(3):2807-2808.
doi: 10.1080/23802359.2020.1788463.

The complete mitochondrial genome of Hapalogenys analis (Perciformes, Haemulidea) except for control region, obtained by whole genome sequencing

Yunya Zheng  1 , Linxiao Feng  1 , Haoyu Liu  1 , Riyu Song  1 , Shengyong Xu  1 , Huilai Shi  1   2 , Tianxiang Gao  1
Affiliations

The complete mitochondrial genome of Hapalogenys analis (Perciformes, Haemulidea) except for control region, obtained by whole genome sequencing

Yunya Zheng et al. Mitochondrial DNA B Resour. .

Abstract

In this study, we obtained the complete mitochondrial genome of Hapalogenys analis using whole genome sequencing. With the exception for control region, this mitochondrial genome, consisting of 16,355 base pairs (bp), contains 13 protein-coding genes (PCGs), 2 ribosomal RNAs (rRNAs), and 21 transfer RNAs (tRNAs). This mitochondrial genome also lacks a tRNA-Pro gene after tRNA-Thr gene. The overall base composition shows 25.45% of T, 29.73% of C, 28.68% of A and 16.14% of G, with a slight A + T rich feature (54.13%). Sanger sequencing is needed to confirm the accuracy of control region, as well as the lack of tRNA-Pro gene. The mitogenome data provides useful genetic markers for the studies on the molecular identification, population genetics, phylogenetic analysis and conservation genetics.

Keywords: Haemulidea; Hapalogenys anails; mitogenome; next-generation sequencing.

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Conflict of interest statement

No potential conflict of interest was reported by the author(s).

Figures

Figure 1.
Figure 1.
Neighbor-joining (NJ) topology for 6 species of family Haemulidae based on 12 H-strand mitochondrial protein-coding genes.
See this image and copyright information in PMC

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