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. 2020 Jul 25;5(3):2994-2995.
doi: 10.1080/23802359.2020.1797571.

The complete chloroplast genome of Typhonium giganteum (Araceae)

Jinhyuk Kim  1 , Junki Lee  1 , Sunseong Choi  1 , Sanghee Um  1 , Hyojin Kim  1 , Hyang Sook Chun  2 , Gyoungju Nah  1
Affiliations

The complete chloroplast genome of Typhonium giganteum (Araceae)

Jinhyuk Kim et al. Mitochondrial DNA B Resour. .

Abstract

The complete chloroplast genome sequence of Typhonium giganteum, a species of the Araceae family, was characterized from the de novo assembly of HiSeq (Illumina Co.) paired-end sequencing data. The chloroplast genome of T. giganteum was 165,289 bp in length, with a large single-copy (LSC) region of 91,747 bp, a small single-copy (SSC) region of 22,550 bp, and a pair of identical inverted repeat regions (IRs) of 25,496 bp. The genome contained a total of 132 genes, including 86 protein-coding genes, 38 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. The phylogenetic analysis of T. giganteum with 12 related species revealed the closest taxonomical relationship with Pinellia pedatisecta in the Araceae.

Keywords: Typhonium giganteum; complete chloroplast genome; next generation sequencing; phylogenetic analysis.

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Conflict of interest statement

No potential conflict of interest was reported by the authors.

Figures

Figure 1.
Figure 1.
The phylogenetic tree was constructed using total chloroplast genome sequences of 12 species and T. giganteum using Maximum Likelihood (ML) method with bootstrap values from 1,000 replicates.
See this image and copyright information in PMC

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