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. 2018 Oct 8;3(2):1129-1130.
doi: 10.1080/23802359.2018.1521309.

Complete mitochondrial genome of brownstripe red snapper, Lutjanus vitta (Perciformes: Lutjanidae)

Sapto Andriyono  1   2 , Jobaidul Alam  1 , Dong Hee Kwak  1 , Hyun-Woo Kim  1   3
Affiliations

Complete mitochondrial genome of brownstripe red snapper, Lutjanus vitta (Perciformes: Lutjanidae)

Sapto Andriyono et al. Mitochondrial DNA B Resour. .

Abstract

The complete mitochondrial genome of the brownstripe red snapper, Lutjanus vitta was determined by MiSeq sequencing platform. The mitogenome of L. vitta (16,498 bp) encoded the typical 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and two non-coding regions (origin of light strand replication; OL and D-Loop control region; CR). Phylogenetic analysis based on the full mitochondrial genome sequences showed that L. vitta is most closely related to L. russellii. The complete mitogenome sequence of L. vitta would provide the information of the genetic biodiversity in Lutjanus fishes, which would be further used for their scientific management in Indonesian waters.

Keywords: Indonesia; Lutjanus vitta; Next generation sequencing; mitogenome; snapper.

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Conflict of interest statement

The authors report that they have no conflicts of interest. The authors alone are responsible for the content and writing of the paper.

Figures

Figure 1.
Figure 1.
Phylogenetic tree of Lutjanus vitta within Lutjanidae. Phylogenetic tree of Lutjanus vitta complete genome was constructed by MEGA7 software with Minimum Evolution (ME) algorithm with 1000 bootstrap replications. GenBank Accession numbers were shown followed by each scientific name. The sequence data for phylogenetic analyses used in this study were as follows: Lutjanus vitta (MH675887), Lutjanus russellii (NC010963), Lutjanus bengalensis (NC011275), Lutjanus kasmira (NC011578), Lutjanus rivulatus (NC009869), Lutjanus argentimaculatus (NC016661), Lutjanus peru (NC027950), Lutjanus guttatus (NC029353), Lutjanus erythropterus (NC031331), Lutjanus sebae (NC012736), Lutjanus malabaricus (NC012736), and furthermore Thunnus albacares (NC014061) as an outgroup.
See this image and copyright information in PMC

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