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Review
. 2021 Jan 13:11:608101.
doi: 10.3389/fmicb.2020.608101. eCollection 2020.

Forensic Applications of Microbiomics: A Review

Affiliations
Review

Forensic Applications of Microbiomics: A Review

Jake M Robinson et al. Front Microbiol. .

Abstract

The rise of microbiomics and metagenomics has been driven by advances in genomic sequencing technology, improved microbial sampling methods, and fast-evolving approaches in bioinformatics. Humans are a host to diverse microbial communities in and on their bodies, which continuously interact with and alter the surrounding environments. Since information relating to these interactions can be extracted by analyzing human and environmental microbial profiles, they have the potential to be relevant to forensics. In this review, we analyzed over 100 papers describing forensic microbiome applications with emphasis on geolocation, personal identification, trace evidence, manner and cause of death, and inference of the postmortem interval (PMI). We found that although the field is in its infancy, utilizing microbiome and metagenome signatures has the potential to enhance the forensic toolkit. However, many of the studies suffer from limited sample sizes and model accuracies, and unrealistic environmental settings, leaving the full potential of microbiomics to forensics unexplored. It is unlikely that the information that can currently be elucidated from microbiomics can be used by law enforcement. Nonetheless, the research to overcome these challenges is ongoing, and it is foreseeable that microbiome-based evidence could contribute to forensic investigations in the future.

Keywords: forensic microbiology; forensic science; metagenomics; microbial forensics; microbiome; microbiomics; postmortem interval.

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Conflict of interest statement

EE consults the DNA Diagnostics Center. CM is a co-founder of Biotia, Inc. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Figures

FIGURE 1
FIGURE 1
A summary of possible sources of forensically relevant microbiota identified by the literature review.

References

    1. Adserias-Garriga J., Hernández M., Quijada N. M., Lázaro D. R., Steadman D., Garcia-Gil J. (2017). Daily thanatomicrobiome changes in soil as an approach of postmortem interval estimation: an ecological perspective. Forensic Sci. Int. 278 388–395. 10.1016/j.forsciint.2017.07.017 - DOI - PubMed
    1. Advenier A. S., Guillard N., Alvarez J. C., Martrille L., Lorin de la Grandmaison G. (2016). Undetermined manner of death: an autopsy series. J. Forensic Sci. 61(Suppl. 1), S154–S158. - PubMed
    1. Afshinnekoo E., Meydan C., Chowdhury S., Jaroudi D., Boyer C., Bernstein N., et al. (2015). Geospatial resolution of human and bacterial diversity from city-scale metagenomics. Cell Syst. 1 72–87. - PMC - PubMed
    1. Aoyagi M., Iwadate K., Fukui K., Abe S., Sakai K., Maebashi K., et al. (2009). A novel method for the diagnosis of drowning by detection of Aeromonas sobria with PCR method. Leg. Med. 11 257–259. 10.1016/j.legalmed.2009.07.003 - DOI - PubMed
    1. Avena C. V., Parfrey L. W., Leff J. W., Archer H. M., Frick W. F., Langwig K. E., et al. (2016). Deconstructing the bat skin microbiome: influences of the host and the environment. Front. Microbiol. 7:1753. 10.3389/fmicb.2016.01753 - DOI - PMC - PubMed