UMI or not UMI, that is the question for scRNA-seq zero-inflation
- PMID: 33526946
- DOI: 10.1038/s41587-020-00810-6
UMI or not UMI, that is the question for scRNA-seq zero-inflation
Comment in
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Reply to: UMI or not UMI, that is the question for scRNA-seq zero-inflation.Nat Biotechnol. 2021 Feb;39(2):160. doi: 10.1038/s41587-020-00811-5. Epub 2021 Feb 1. Nat Biotechnol. 2021. PMID: 33526947 No abstract available.
Comment on
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Droplet scRNA-seq is not zero-inflated.Nat Biotechnol. 2020 Feb;38(2):147-150. doi: 10.1038/s41587-019-0379-5. Nat Biotechnol. 2020. PMID: 31937974 No abstract available.
References
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- Svensson, V. Droplet scRNA-seq is not zero-inflated Nat. Biotechnol. 38, 147–150 (2020).
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- Kivioja, T. et al. Counting absolute numbers of molecules using unique molecular identifiers. Nat. Methods 9, 72–74 (2012). - DOI
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- Islam, S. et al. Quantitative single-cell RNA-seq with unique molecular identifiers. Nat. Methods 11, 163–166 (2014). - DOI
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- Ding, J. et al. Systematic comparison of single-cell and single-nucleus RNA-sequencing methods. Nat. Biotechnol. 38, 737–746 (2020). - DOI
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- Chen, W. et al. UMI-count modeling and differential expression analysis for single-cell RNA sequencing. Genome Biol. 19, 70 (2018). - DOI
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