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. 2021 Apr;166(4):1263-1265.
doi: 10.1007/s00705-021-04985-4. Epub 2021 Feb 14.

Genomic analysis of bacteriophage Xoo-sp13 infecting Xanthomonas oryzae pv. oryzae

Amina Nazir #  1   2 , Zhaoxia Dong #  3 , Jin Liu #  3 , Rana Adnan Tahir  1 , Madiha Rasheed  4 , Hong Qing  5 , Donghai Peng  6 , Yigang Tong  7
Affiliations

Genomic analysis of bacteriophage Xoo-sp13 infecting Xanthomonas oryzae pv. oryzae

Amina Nazir et al. Arch Virol. 2021 Apr.

Abstract

Xanthomonas oryzae pv. oryzae is a bacterial pathogen that gives rise to diseases in rice all over the world. A bacteriophage infecting this bacterium was isolated from rice fields in China. Here, we report the complete genome sequence of this phage, which has a linear dsDNA genome of 309,023 bp and a G + C content of 42.43%. It contains 401 open reading frames and encodes 28 tRNAs. It belongs to the family Myoviridae and has a broad host range, making it a possible candidate for phage therapy.

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Conflict of interest statement

The authors declare that they have no conflict of interest.

Figures

Fig. 1.
Fig. 1.
Schematic representation of the dsDNA genome of phage Xoo-sp13. Putative ORFs are presented as arrows, with predicted functions where available. Proposed modules are based on predicted functions. Turquoise, hypothetical protein; yellow, unknown; pink, nucleotide metabolism and replication; green, Morphogenesis; red, lysis; blue, DNA packaging. The map was drawn with CLC Genomics main Workbench version 3.6.1 (CLC bio, Aarhus, Denmark)
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