Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2021 Feb 11;6(2):437-438.
doi: 10.1080/23802359.2020.1870896.

The complete chloroplast genome of Thalictrum baicalense Turcz. ex Ledeb

Affiliations

The complete chloroplast genome of Thalictrum baicalense Turcz. ex Ledeb

Yanfeng He et al. Mitochondrial DNA B Resour. .

Abstract

Thalictrum baicalense Turcz. ex Ledeb. is a well-known herbaceous perennid that has been used as a traditional medicine to treat influenza, hepatitis, and detoxfeaction. In this study, we release and detail the complete chloroplast genome sequences of T. baicalense. The whole chloroplast genome was 155,859 bp in length and comprised 130 genes, including 84 protein-coding genes, 37 tRNA genes, eight rRNA genes. The T. baicalense chloroplast genome had a GC content of 38.39%. The phylogenetic relationships inferred that T. baicalense, T. tenue, T. minus and T. petaloideum are closely related to each other within the genus Thalictrum.

Keywords: Thalictrum baicalense; complete chloroplast genome; phylogenetic analysis.

PubMed Disclaimer

Conflict of interest statement

No potential conflict of interest was reported by the author(s).

Figures

Figure 1.
Figure 1.
The maximum-likelihood (ML) phylogenetic tree of 21 complete chloroplast genome sequences.

References

    1. Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. . 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19(5):455–477. - PMC - PubMed
    1. Chen S, Zhou Y, Chen Y, Gu J.. 2018. Fastp: an ultra-fast all-in-one FASTQ preprocessor. Bioinformatics. 34(17):i884–890. - PMC - PubMed
    1. Chen SB, Chen SL, Xiao PG.. 2003. Ethnopharmacological investigations on Thalictrum plants in China. J Asian Nat Prod Res. 5(4):263–271. - PubMed
    1. Katoh K, Standley DM.. 2013. MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol. 30(4):772–780. - PMC - PubMed
    1. Kumar S, Stecher G, Tamura K.. 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol. 33(7):1870–1874. - PMC - PubMed

LinkOut - more resources