Automated Laboratory Growth Assessment and Maintenance of Azotobacter vinelandii
- PMID: 33656286
- DOI: 10.1002/cpz1.57
Automated Laboratory Growth Assessment and Maintenance of Azotobacter vinelandii
Erratum in
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Correction: Automated Laboratory Growth Assessment and Maintenance of Azotobacter vinelandii.Curr Protoc. 2022 Jan;2(1):e363. doi: 10.1002/cpz1.363. Curr Protoc. 2022. PMID: 35034426 Free PMC article. No abstract available.
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Group Correction Statement (Data Availability Statements).Curr Protoc. 2022 Aug;2(8):e552. doi: 10.1002/cpz1.552. Curr Protoc. 2022. PMID: 36005902 Free PMC article. No abstract available.
Abstract
Azotobacter vinelandii (A. vinelandii) is a commonly used model organism for the study of aerobic respiration, the bacterial production of several industrially relevant compounds, and, perhaps most significantly, the genetics and biochemistry of biological nitrogen fixation. Laboratory growth assessments of A. vinelandii are useful for evaluating the impact of environmental and genetic modifications on physiological properties, including diazotrophy. However, researchers typically rely on manual growth methods that are oftentimes laborious and inefficient. We present a protocol for the automated growth assessment of A. vinelandii on a microplate reader, particularly well-suited for studies of diazotrophic growth. We discuss common pitfalls and strategies for protocol optimization, and demonstrate the protocol's application toward growth evaluation of strains carrying modifications to nitrogen-fixation genes. © 2021 The Authors. Basic Protocol 1: Preparation of A. vinelandii plate cultures from frozen stock Basic Protocol 2: Preparation of A. vinelandii liquid precultures Basic Protocol 3: Automated growth rate experiment of A. vinelandii on a microplate reader.
Keywords: Azotobacter vinelandii; bacterial growth; microplate reader; nitrogen fixation; nitrogenase.
© 2021 The Authors.
References
Literature Cited
-
- Ambrosio, R., Ortiz-Marquez, J. C. F., & Curatti, L. (2017). Metabolic engineering of a diazotrophic bacterium improves ammonium release and biofertilization of plants and microalgae. Metabolic Engineering, 40, 59-68. doi: 10.1016/j.ymben.2017.01.002.
-
- Arragain, S., Jimenez-Vicente, E., Scandurra, A. A., Buren, S., Rubio, L. M., & EchavarriErasun, C. (2017). Diversity and functional analysis of the FeMo-cofactor maturase NifB. Frontiers in Plant Science, 8, 1947. doi: 10.3389/fpls.2017.01947.
-
- Buren, S., & Rubio, L. M. (2018). State of the art in eukaryotic nitrogenase engineering. FEMS Microbiology Letters, 365(2). doi: 10.1093/femsle/fnx274.
-
- Burk, D., & Lineweaver, H. (1930). The influence of fixed nitrogen on Azotobacter. Journal of Bacteriology, 19(6), 389-414. doi: 10.1128/JB.19.6.389-414.1930.
-
- Burnett, L. C., Lunn, G., & Coico, R. (2009). Biosafety: Guidelines for working with pathogenic and infectious microorganisms. Current Protocols in Microbiology, 13(1). doi: 10.1002/9780471729259.mc01a01s13.