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. 2021 Jun;82(6):276-316.
doi: 10.1016/j.jinf.2021.03.017. Epub 2021 Mar 25.

Rapid whole-genome sequencing to inform COVID-19 outbreak response in Vietnam

Nguyen Van Vinh Chau  1 , Nguyen Thi Thu Hong  2 , Nghiem My Ngoc  3 , Nguyen To Anh  2 , Huynh Trung Trieu  3 , Le Nguyen Truc Nhu  2 , Lam Minh Yen  2 , Ngo Ngoc Quang Minh  4 , Nguyen Thanh Phong  3 , Nguyen Thanh Truong  3 , Le Thi Thu Huong  3 , Tran Nguyen Hoang Tu  3 , Le Manh Hung  3 , Tran Tan Thanh  2 , Nguyen Thanh Dung  3 , Nguyen Tri Dung  5 , Guy Thwaites  6 , Le Van Tan  7 ; for OUCRU COVID-19 research group
Affiliations

Rapid whole-genome sequencing to inform COVID-19 outbreak response in Vietnam

Nguyen Van Vinh Chau et al. J Infect. 2021 Jun.
No abstract available

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Figures

Fig 1
Fig. 1
Maximum likelihood phylogenetic tree showing the relatedness between the Vietnamese SARS-CoV-2 sub-lineage A.23.1 (in red) obtained from the present study and representatives of global A.23.1 strains (B). Continents or countries from where A.23.1 has been documented are color-coded. Africa includes Rwanda, Uganda and Ghana. Europe covers non-UK countries, including Switzerland, Belgium and Denmark. Asia includes United Arab Emirates. Americas includes Canada and United States. Similar to A.23.1 strains identified elsewhere, all the Vietnamese strains carried the four defining single nucleotide polymorphisms (F157L, V367F, Q613H and P681R) in the spike protein.
See this image and copyright information in PMC

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