Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2021 Apr 1;10(13):e00209-21.
doi: 10.1128/MRA.00209-21.

Complete Genome Sequences of Microbacterium Bacteriophages Danno, Otwor, and Scumberland, Isolated in Clarksville, Tennessee

Sergei A Markov  1 , James C Church  2 , Leong Lee  2 , Cole M Bell  3 , Sarah D Binkley  3 , Kevin M Bouma  3 , Kaitlin M Hutson  3 , Gregory S Markov  3 , Elizabeth C Mason  3 , Gabrielle B Rueff  3 , Taiwo O Sennuga  3 , Montana H Simpson  3 , Robin J Zimmer  3 , Diana G Villalpando  3
Affiliations

Complete Genome Sequences of Microbacterium Bacteriophages Danno, Otwor, and Scumberland, Isolated in Clarksville, Tennessee

Sergei A Markov et al. Microbiol Resour Announc. .

Abstract

This paper reports the genome sequences of bacteriophages isolated from soil samples using Microbacterium foliorum Phages Danno and Otwor (cluster EE) have genomes of 17,452 bp and 17,454 bp, respectively, and 25 predicted genes. The phage Scumberland (cluster EC) has a genome of 53,276 bp with 92 predicted genes.

PubMed Disclaimer

Figures

FIG 1
FIG 1
Transmission electron microscopy photos of Microbacterium foliorum bacteriophages Danno (A), Otwor (B), and Scumberland (C) showing Siphoviridae morphology with a long flexible tail. Bacteriophage samples were stained using 1% uranyl acetate on grids attached to Pelco tabs (Ted Peller, Inc., Redding, CA). The Hitachi H-7650 transmission electron microscope (Tokyo, Japan) was used with an accelerating voltage of 100 kV.
See this image and copyright information in PMC

Similar articles

  • Genome sequence of Microbacterium foliorum bacteriophage DumpQuist isolated from soil in Clarksville, Tennessee.
    Markov SA, Olusoga KO, Oni PO, Henderson GA. Markov SA, et al. Microbiol Resour Announc. 2023 Dec 14;12(12):e0092323. doi: 10.1128/MRA.00923-23. Epub 2023 Nov 22. Microbiol Resour Announc. 2023. PMID: 37991355 Free PMC article.
  • Genome Sequences of Microbacterium foliorum Phages Anseraureola, Pondwater, and Yasuo.
    Bamgbowu D, Bsoumai J, Butura J, Cady E, Cholod G, Collibee I, Dompreh L, Eisner S, Elmaleh M, Fitzgerald K, Gillis E, Horgan A, Judd D, Keefe J, Kovalski E, LaBianca K, Lee P, Lin F, Maiuri H, McDonald C, McKnight A, Meseerole M, Mizra F, Monger E, Moore E, Nguyen N, Noel B, O'Connor D, Pagani R, Palmgren M, Pan K, Pech B, Qian J, Rastegar S, Simas B, Southard A, Tracy M, Vuong H, Whelan S, Zou A, Punska E, Pause R, Zhang F, Ribbe A, Chien P, Rocheleau J. Bamgbowu D, et al. Microbiol Resour Announc. 2022 Nov 17;11(11):e0084922. doi: 10.1128/mra.00849-22. Epub 2022 Oct 13. Microbiol Resour Announc. 2022. PMID: 36227095 Free PMC article.
  • Genome Sequences of Bacteriophages ClearAsMud and Kauala, Isolated from Microbacterium foliorum.
    Lin H, Reeves M, Acevedo M, Bass K, Chau E, Ching B, Enriquez E, Evans S, Mamora K, Pang C, Santos M, Tafoya C, Vaca M, Van Iderstein W, Velasco L, Williams V, Yonemoto G, Yonemoto T, Choi J, Dean N, Diaz A. Lin H, et al. Microbiol Resour Announc. 2020 Nov 12;9(46):e01026-20. doi: 10.1128/MRA.01026-20. Microbiol Resour Announc. 2020. PMID: 33184160 Free PMC article.
  • Protein repertoire of double-stranded DNA bacteriophages.
    Liu J, Glazko G, Mushegian A. Liu J, et al. Virus Res. 2006 Apr;117(1):68-80. doi: 10.1016/j.virusres.2006.01.015. Epub 2006 Feb 21. Virus Res. 2006. PMID: 16490276 Review.
  • Jumbo bacteriophages.
    Hendrix RW. Hendrix RW. Curr Top Microbiol Immunol. 2009;328:229-40. doi: 10.1007/978-3-540-68618-7_7. Curr Top Microbiol Immunol. 2009. PMID: 19216440 Review.
See all similar articles

Cited by

  • Complete genome sequence of bacteriophage Godfather isolated from Microbacterium foliorum.
    Hutchings J, Bower L, Collum E, Hester T, Hunter M, Kelly C, Reynolds L, Moore C, Edwards D. Hutchings J, et al. Microbiol Resour Announc. 2025 Feb 11;14(2):e0088824. doi: 10.1128/mra.00888-24. Epub 2025 Jan 16. Microbiol Resour Announc. 2025. PMID: 39817740 Free PMC article.
  • Complete Genome Sequence of Microbacterium foliorum Bacteriophage Librie.
    Markov SA, Arms NL, Boyce KJ, Cardona Pendleton MR, Couch AM, Duncan LE, Enodiana OI, Gibson JN, Greer KJ, Habib CM, Isaac UG, Johnson TC, Lewis GG, Long SK, Ogas IA, Olusoga KO, Oni PO, Victory KH, Zimmer RJ. Markov SA, et al. Microbiol Resour Announc. 2022 Oct 20;11(10):e0091822. doi: 10.1128/mra.00918-22. Epub 2022 Sep 19. Microbiol Resour Announc. 2022. PMID: 36121231 Free PMC article.

References

    1. Sarkis GJ, Hatfull GF. 1998. Mycobacteriophages. Methods Mol Biol 101:145–173. - PubMed
    1. Pope WH, Jacobs-Sera D, Russell DA, Peebles CL, Al-Atrache Z, Alcoser TA, Alexander LM, Alfano MB, Alford ST, Amy NE, Anderson MD, Anderson AG, Ang AAS, Ares M, Barber AJ, Barker LP, Barrett JM, Barshop WD, Bauerle CM, Bayles IM, Belfield KL, Best AA, Borjon A, Bowman CA, Boyer CA, Bradley KW, Bradley VA, Broadway LN, Budwal K, Busby KN, Campbell IW, Campbell AM, Carey A, Caruso SM, Chew RD, Cockburn CL, Cohen LB, Corajod JM, Cresawn SG, Davis KR, Deng L, Denver DR, Dixon BR, Ekram S, Elgin SCR, Engelsen AE, English BEV, Erb ML, Estrada C, Filliger LZ, et al.. 2011. Expanding the diversity of mycobacteriophages: insights into genome architecture and evolution. PLoS One 6:e16329. doi:10.1371/journal.pone.0016329. - DOI - PMC - PubMed
    1. Russell DA. 2018. Sequencing, assembling, and finishing complete bacteriophage genomes. Methods Mol Biol 1681:109–125. doi:10.1007/978-1-4939-7343-9_9. - DOI - PubMed
    1. Delcher AL, Harmon D, Kasif S, White O, Salzberg SL. 1999. Improved microbial gene identification with GLIMMER. Nucleic Acids Res 27:4636–4641. doi:10.1093/nar/27.23.4636. - DOI - PMC - PubMed
    1. Besemer J, Borodovsky M. 2005. GeneMark: Web software for gene finding in prokaryotes, eukaryotes, and viruses. Nucleic Acids Res 33:451–454. doi:10.1093/nar/gki487. - DOI - PMC - PubMed

LinkOut - more resources